Os11g0105400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L10 family protein.
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Os11g0105400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L10 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.78 | 0.465 | 9.85 | -0.133 | 1.49 | 0.544 | 1.15 | -0.988 | -0.136 | 16.5 | 20.1 | 4113 | -- | -- |
| 97.53 | 0.46 | 9.81 | 0.0542 | 1.51 | 0.816 | 1.09 | -- | -0.096 | 16.5 | 19.5 | 2765 | -- | -- |
| 99.68 | 0.465 | 9.84 | -0.0967 | 1.51 | 0.62 | -- | -0.932 | -0.119 | 16.4 | 19.8 | 2747 | -- | -- |
| 100.96 | 0.468 | 9.81 | 0.0541 | 1.51 | 0.789 | -- | -- | -0.087 | 16.4 | 19.85 | 2745 | -- | -- |
| 216.62 | 0.689 | 9.77 | 0.315 | -- | 0.565 | -- | 0.191 | -0.0193 | -- | 19.8 | 2747 | -- | -- |
| 108.59 | 0.489 | 9.77 | 0.462 | 1.47 | -- | 1.27 | -- | 0.0972 | 16.5 | -- | -- | -- | -- |
| 112.93 | 0.498 | 9.76 | 0.472 | 1.47 | -- | -- | -- | 0.104 | 16.5 | -- | -- | -- | -- |
| 216.8 | 0.689 | 9.77 | 0.285 | -- | 0.553 | -- | -- | -0.0259 | -- | 19.8 | 2747 | -- | -- |
| 101.02 | 0.468 | 9.81 | -- | 1.51 | 0.814 | -- | -- | -0.0914 | 16.4 | 19.9 | 2745 | -- | -- |
| 229.34 | 0.708 | 9.75 | 0.414 | -- | -- | -- | -- | 0.0651 | -- | -- | -- | -- | -- |
| 118.8 | 0.51 | 9.78 | -- | 1.47 | -- | -- | -- | 0.0515 | 16.5 | -- | -- | -- | -- |
| 218.87 | 0.691 | 9.78 | -- | -- | 0.595 | -- | -- | -0.0633 | -- | 19.9 | 3240 | -- | -- |
| 233.86 | 0.714 | 9.76 | -- | -- | -- | -- | -- | 0.0191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 92.29 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 4 | 92.91 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 14 | 93.68 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 19 | 93.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 5 |
| 22 | 94.05 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 34 | 94.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 35 | 94.32 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 43 | 94.56 | humidity | 50 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 45 | 94.64 | temperature | 20 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 48 | 94.71 | radiation | 30 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 50 | 94.76 | temperature | 20 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 54 | 94.83 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 8 |
| 67 | 95.05 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 68 | 95.05 | temperature | 10 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 77 | 95.15 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 98 | 95.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 100 | 95.38 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 101 | 95.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 125 | 95.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 145 | 95.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 6 |
| 165 | 95.70 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 223 | 96.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 235 | 96.05 | wind | 5 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 261 | 96.19 | humidity | 50 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 262 | 96.19 | temperature | 20 | 4320 | < th | dose independent | rect. | 16 | 6 |
| 264 | 96.19 | humidity | 50 | 43200 | > th | dose independent | rect. | 22 | 10 |
| 276 | 96.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 277 | 96.25 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 294 | 96.32 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 314 | 96.35 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 324 | 96.37 | humidity | 60 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 330 | 96.38 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 364 | 96.48 | wind | 1 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 372 | 96.49 | temperature | 25 | 90 | > th | dose dependent | sin | 5 | NA |
| 374 | 96.50 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 453 | 96.65 | temperature | 25 | 90 | > th | dose dependent | rect. | 20 | 17 |
| 471 | 96.70 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 476 | 96.71 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 477 | 96.71 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 481 | 96.71 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 505 | 96.74 | temperature | 20 | 1440 | > th | dose independent | sin | 11 | NA |
| 509 | 96.74 | radiation | 1 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 511 | 96.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 517 | 96.75 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 519 | 96.76 | radiation | 40 | 270 | > th | dose independent | rect. | 9 | 1 |
| 521 | 96.76 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 529 | 96.78 | wind | 3 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 563 | 96.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 603 | 96.90 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 1 |
| 612 | 96.92 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 623 | 96.93 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 650 | 96.95 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 651 | 96.95 | wind | 3 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 731 | 97.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 732 | 97.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 772 | 97.12 | radiation | 10 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 871 | 97.26 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 877 | 97.27 | humidity | 70 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 883 | 97.27 | wind | 1 | 270 | > th | dose independent | rect. | 10 | 22 |
| 907 | 97.30 | wind | 5 | 90 | < th | dose independent | rect. | 3 | 5 |
| 916 | 97.31 | radiation | 30 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 925 | 97.33 | humidity | 70 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 951 | 97.37 | wind | 1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 968 | 97.39 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |