Os11g0104300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Clp, N terminal domain containing protein.
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Os11g0104300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Clp, N terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.22 | 0.811 | 3.3 | 0.621 | 0.0336 | 3.13 | -0.417 | 5.25 | 0.0353 | 13.9 | 18.7 | 685 | -- | -- |
| 309.44 | 0.819 | 3.25 | 0.783 | 0.0395 | 1.23 | -0.0528 | -- | 0.0867 | 9.64 | 19.64 | 715 | -- | -- |
| 298.75 | 0.805 | 3.3 | 0.611 | 0.0387 | 3.19 | -- | 5.25 | 0.0312 | 13.7 | 18.51 | 665 | -- | -- |
| 309.06 | 0.819 | 3.25 | 0.747 | 0.0764 | 1.17 | -- | -- | 0.0798 | 15.7 | 20.13 | 716 | -- | -- |
| 298.84 | 0.805 | 3.3 | 0.611 | -- | 3.22 | -- | 5.29 | 0.0314 | -- | 18.53 | 665 | -- | -- |
| 318.52 | 0.837 | 3.27 | 0.505 | 0.16 | -- | 0.0356 | -- | -0.0252 | 12.3 | -- | -- | -- | -- |
| 318.53 | 0.836 | 3.27 | 0.506 | 0.16 | -- | -- | -- | -0.025 | 12.3 | -- | -- | -- | -- |
| 309.03 | 0.819 | 3.24 | 0.764 | -- | 1.03 | -- | -- | 0.102 | -- | 21.8 | 898 | -- | -- |
| 321.38 | 0.835 | 3.27 | -- | 0.0978 | 0.762 | -- | -- | -0.0643 | 13.7 | 18.82 | 684 | -- | -- |
| 320.13 | 0.836 | 3.27 | 0.501 | -- | -- | -- | -- | -0.0275 | -- | -- | -- | -- | -- |
| 325.28 | 0.844 | 3.28 | -- | 0.152 | -- | -- | -- | -0.0814 | 12.2 | -- | -- | -- | -- |
| 321.99 | 0.836 | 3.28 | -- | -- | 0.823 | -- | -- | -0.0481 | -- | 18.9 | 703 | -- | -- |
| 326.74 | 0.844 | 3.28 | -- | -- | -- | -- | -- | -0.0831 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 297.07 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 22 |
| 3 | 298.44 | wind | 1.0 | 10 | > th | dose independent | rect. | 10 | 19 |
| 5 | 299.30 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 3 |
| 7 | 299.54 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 8 | 299.90 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 12 | 300.50 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 13 | 300.55 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 14 | 300.59 | humidity | 50.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 16 | 300.61 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 19 |
| 17 | 300.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 18 | 300.63 | humidity | 50.0 | 10 | < th | dose dependent | sin | 7 | NA |
| 19 | 300.66 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 21 | 300.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 23 | 300.86 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 34 | 301.00 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 37 | 301.02 | humidity | 50.0 | 10 | < th | dose independent | rect. | 11 | 3 |
| 116 | 301.46 | temperature | 20.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 127 | 301.50 | radiation | 40.0 | 10 | < th | dose independent | rect. | 10 | 18 |
| 148 | 301.74 | humidity | 80.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 149 | 301.75 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 150 | 301.77 | wind | 7.0 | 30 | < th | dose independent | rect. | 10 | 18 |
| 167 | 301.87 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 15 |
| 177 | 302.00 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 12 |
| 206 | 302.21 | humidity | 80.0 | 90 | < th | dose independent | rect. | 10 | 4 |
| 209 | 302.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 12 |
| 218 | 302.27 | radiation | 30.0 | 270 | > th | dose independent | rect. | 10 | 1 |
| 254 | 302.42 | humidity | 50.0 | 90 | < th | dose independent | rect. | 11 | 2 |
| 290 | 302.48 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 10 | 18 |
| 292 | 302.48 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 5 | 9 |
| 296 | 302.48 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 10 | 18 |
| 305 | 302.52 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 5 | 23 |
| 311 | 302.53 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 313 | 302.54 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 316 | 302.57 | temperature | 20.0 | 720 | < th | dose dependent | no | NA | NA |
| 326 | 302.59 | humidity | 50.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 331 | 302.62 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 359 | 302.79 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 11 |
| 360 | 302.79 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 380 | 302.81 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 395 | 302.89 | temperature | 15.0 | 10 | > th | dose independent | rect. | 10 | 18 |
| 403 | 302.93 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 6 |
| 404 | 302.93 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 406 | 302.93 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 407 | 302.93 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 6 |
| 408 | 302.93 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 6 |
| 436 | 303.03 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 6 |
| 440 | 303.03 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 478 | 303.06 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 4 | 22 |
| 492 | 303.12 | humidity | 50.0 | 720 | > th | dose independent | rect. | 4 | 10 |
| 504 | 303.16 | radiation | 30.0 | 270 | < th | dose independent | rect. | 3 | 13 |
| 520 | 303.20 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 538 | 303.29 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 2 |
| 540 | 303.31 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 10 | 1 |
| 543 | 303.33 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 12 | 11 |
| 545 | 303.33 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 552 | 303.38 | radiation | 40.0 | 270 | < th | dose independent | rect. | 12 | 11 |
| 553 | 303.39 | humidity | 80.0 | 90 | < th | dose independent | rect. | 10 | 7 |
| 572 | 303.53 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 6 |
| 575 | 303.54 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 4 |
| 576 | 303.54 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 12 |
| 588 | 303.62 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 11 | 2 |
| 614 | 303.70 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 628 | 303.76 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 6 |
| 632 | 303.78 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 10 | 4 |
| 636 | 303.82 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 650 | 303.95 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 11 |
| 651 | 303.95 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 652 | 303.96 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 704 | 304.36 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 6 |
| 705 | 304.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 717 | 304.41 | humidity | 50.0 | 720 | > th | dose independent | rect. | 16 | 12 |
| 719 | 304.42 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 10 | 18 |
| 723 | 304.44 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 756 | 304.44 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 790 | 304.46 | temperature | 30.0 | 90 | < th | dose independent | rect. | 10 | 18 |
| 791 | 304.46 | wind | 9.0 | 30 | < th | dose dependent | rect. | 10 | 18 |
| 797 | 304.49 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 842 | 304.54 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 844 | 304.56 | humidity | 50.0 | 10 | < th | dose independent | sin | 7 | NA |
| 888 | 304.59 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 900 | 304.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 13 |
| 903 | 304.66 | wind | 3.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 924 | 304.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 943 | 304.75 | wind | 3.0 | 30 | < th | dose dependent | rect. | 3 | 1 |
| 954 | 304.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 13 |
| 957 | 304.82 | radiation | 30.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 984 | 304.91 | wind | 3.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 999 | 304.94 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 21 |