BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0104300 Os11g0104300|J023082K04
(435 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29970.1 | chr2:12776601-12779784 FORWARD LENGTH=1003 182 3e-46
AT2G40130.2 | chr2:16766030-16769074 FORWARD LENGTH=911 161 7e-40
AT1G07200.2 | chr1:2209033-2212316 REVERSE LENGTH=980 152 3e-37
AT5G57710.1 | chr5:23384794-23388052 FORWARD LENGTH=991 106 3e-23
AT3G52490.1 | chr3:19455850-19458721 REVERSE LENGTH=816 76 3e-14
AT5G57130.1 | chr5:23145291-23149395 FORWARD LENGTH=1029 75 7e-14
AT4G29920.1 | chr4:14632653-14635885 REVERSE LENGTH=1018 74 2e-13
AT4G30350.1 | chr4:14848031-14850973 FORWARD LENGTH=925 72 5e-13
>AT2G29970.1 | chr2:12776601-12779784 FORWARD LENGTH=1003
Length = 1002
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 177/382 (46%), Gaps = 32/382 (8%)
Query: 1 MPTPVAAARQCXXXXXXXXXXXXXXXXXXXXXXQTTXXXXXXXXXXXXXXXXXXXXXXXX 60
MPTPV ARQC QTT
Sbjct: 1 MPTPVTTARQCLTEETARALDDAVSVARRRSHAQTTSLHAVSGLLTMPSSILREVCISRA 60
Query: 61 XXXX-XXXXVQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQR 119
+Q +AL+LC VSLDRLP D PPVSNSLMAAIKRSQA QR
Sbjct: 61 AHNTPYSSRLQFRALELCVGVSLDRLPSSKSTPTTTVEED-PPVSNSLMAAIKRSQATQR 119
Query: 120 RNPDTFHFY--HQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILR 177
R+P+T+H + H +T + +KVEL + +L+ILDDP+VSRVF EAGFRS DIKL +L
Sbjct: 120 RHPETYHLHQIHGNNNTETTSVLKVELKYFILSILDDPIVSRVFGEAGFRSTDIKLDVLH 179
Query: 178 PAXXXXXXXXXXXXXXXXXXXXCSFXXXXXXXV--PSPAGNLAGAGEENCRRIAEILSR- 234
P C+ V P G+L +ENCRRI E+L+R
Sbjct: 180 PPVTSQFSSRFTSRSRIPPLFLCNLPESDSGRVRFGFPFGDL----DENCRRIGEVLARK 235
Query: 235 -GRNPMLVGVGXXXXXXXXXXX--------XPYRIIHVDPNTIDRSDLGVAAA------- 278
+NP+LVGV P I + +I S++ V +
Sbjct: 236 DKKNPLLVGVCGVEALKTFTDSINRGKFGFLPLEISGLSVVSIKISEVLVDGSRIDIKFD 295
Query: 279 -MASATSGLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLETHSKVGRVWVMGWSATY 337
+ SG+++++G+LK L D + + + V ++ +L+ H + ++W +G ++
Sbjct: 296 DLGRLKSGMVLNLGELKVLA--SDVFSVDVIEKFVLKLADLLKLHRE--KLWFIGSVSSN 351
Query: 338 ETYLAFLSKFPLVDKDWDLQLL 359
ETYL + +FP +DKDW+L LL
Sbjct: 352 ETYLKLIERFPTIDKDWNLHLL 373
>AT2G40130.2 | chr2:16766030-16769074 FORWARD LENGTH=911
Length = 910
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/331 (34%), Positives = 158/331 (47%), Gaps = 58/331 (17%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQRRNPDTFHFY 128
+Q KALDLC +VSLDR+ D PPVSNSLMAAIKRSQA+QRR P+ F Y
Sbjct: 68 LQFKALDLCLSVSLDRI----QSGHQLGSDDSPPVSNSLMAAIKRSQAHQRRLPENFRIY 123
Query: 129 HQAATAQTP---AAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILRPAXXXXXX 185
+ + +Q + VKVEL L+L+ILDDPVVSRVF EAGFRS ++KL+I+RP
Sbjct: 124 QEMSQSQNQNSLSCVKVELRQLILSILDDPVVSRVFGEAGFRSSELKLSIIRPV------ 177
Query: 186 XXXXXXXXXXXXXXCSFXXXXXXXVPSPAG------NLAGAGEENCRRIAEILS--RGRN 237
C+ P+P +L G+ + RRI+ + + +GRN
Sbjct: 178 PHLLRYSSQQPLFLCNLTGNPE---PNPVRWGFTVPSLNFNGDLDYRRISAVFTKDKGRN 234
Query: 238 PMLVGV----------GXXXXXXXXXXXXPYRI-----------------IHVDPNTIDR 270
P+LVGV P ++ + D D
Sbjct: 235 PLLVGVSAYGVLTSYLNSLEKNQTDGMILPTKLHGLTAVNIGSEISDQISVKFDKTYTDT 294
Query: 271 --SDLGVAAAMASATSGLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLETHSKVGRV 328
DLG A S GL++ GDL+ E +V ++ +L H + RV
Sbjct: 295 RFHDLGKLAEQGSG-PGLLLHYGDLRVFTNGEGNVP--AANYIVNRISELLRRHGR--RV 349
Query: 329 WVMGWSATYETYLAFLSKFPLVDKDWDLQLL 359
W++G + + E Y + +FP V+KDWDLQLL
Sbjct: 350 WLIGATTSNEVYEKMMRRFPNVEKDWDLQLL 380
>AT1G07200.2 | chr1:2209033-2212316 REVERSE LENGTH=980
Length = 979
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 173/399 (43%), Gaps = 58/399 (14%)
Query: 1 MPTPVAAARQCXXXXXXXXXXXXXXXXXXXXXXQTTXXXXXXXXXXXXXXXXXXXXXXXX 60
MPTPV AR+C QTT
Sbjct: 1 MPTPVTTARECLTEEAARALDDAVVVARRRSHAQTTSLHAVSALLAMPSSILREVCVSRA 60
Query: 61 XXXX-XXXXVQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQR 119
+Q +AL+LC VSLDRLP ++PPVSNSLMAAIKRSQANQR
Sbjct: 61 ARSVPYSSRLQFRALELCVGVSLDRLPSSKSPATE----EDPPVSNSLMAAIKRSQANQR 116
Query: 120 RNPDTFHFYHQAATAQ-----TPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLA 174
R+P+++H A+ +KVEL + +L+ILDDP+V+RVF EAGFRS +IKL
Sbjct: 117 RHPESYHLQQIHASNNGGGGCQTTVLKVELKYFILSILDDPIVNRVFGEAGFRSSEIKLD 176
Query: 175 ILRPAXXXXXXXXXXXXXXXXXXXXCS--FXXXXXXXVPSPAGNLAGAG--EENCRRIAE 230
+L P C F P+ +G+ +EN RRI E
Sbjct: 177 VLHPP--------VTQLSSRFSRGRCPPLFLCNLPNSDPNREFPFSGSSGFDENSRRIGE 228
Query: 231 ILSR--GRNPMLVG-------------VGXXXXXXXXXXXXPYRIIHVDPNT-------- 267
+L R +NP+L+G + +I ++
Sbjct: 229 VLGRKDKKNPLLIGNCANEALKTFTDSINSGKLGFLQMDISGLSLISIEKEISEILADGS 288
Query: 268 -------IDRSDLGVAAAMASATSGLIISIGDLKQLVPDEDAEAQEKGRRVVAEVTRVLE 320
+ DLG + + SG+++++G+LK L +EA +V++++ +L+
Sbjct: 289 KNEEEIRMKVDDLGRTVEQSGSKSGIVLNLGELKVLT----SEANAALEILVSKLSDLLK 344
Query: 321 THSKVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQLL 359
SK ++ +G ++ ETY + +FP ++KDWDL +L
Sbjct: 345 HESK--QLSFIGCVSSNETYTKLIDRFPTIEKDWDLHVL 381
>AT5G57710.1 | chr5:23384794-23388052 FORWARD LENGTH=991
Length = 990
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 144/340 (42%), Gaps = 79/340 (23%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQRRN-PDTFHF 127
+Q +AL+LCF+V+L+RLP ++PP+SN+LMAA+KR+QA+QRR P+
Sbjct: 67 LQCRALELCFSVALERLPTATTTPG-----NDPPISNALMAALKRAQAHQRRGCPEQQQ- 120
Query: 128 YHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAILR---------P 178
Q AVKVEL L+++ILDDP VSRV EA F S +K I + P
Sbjct: 121 -------QPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKATIEQSLNNSVTPTP 173
Query: 179 AXXXXXXXXXXXXXXXXXXXXCSFXXXXXXXVPSPAGNLAGAGEENCRRIAEILSRG--R 236
S+ S + + ++ R+ +IL R +
Sbjct: 174 IPSVSSVGLNFRPGGGGPMTRNSYLNPRLQQNASSVQS-GVSKNDDVERVMDILGRAKKK 232
Query: 237 NPMLVGVGXXXXXXXXXXXXPYRIIHVDPNTIDRSDLGVAAAMASATSGL---------- 286
NP+LVG P R+I I+ ++G A S L
Sbjct: 233 NPVLVG-----------DSEPGRVIREILKKIEVGEVGNLAVKNSKVVSLEEISSDKALR 281
Query: 287 -----------------------IISIGDLKQLVPDEDAE------AQEKGRRVVAEVTR 317
I+ +GDLK LV + A E GR V E+ R
Sbjct: 282 IKELDGLLQTRLKNSDPIGGGGVILDLGDLKWLVEQPSSTQPPATVAVEIGRTAVVELRR 341
Query: 318 VLETHSKVGRVWVMGWSATYETYLAFLSKFPLVDKDWDLQ 357
+LE GR+W +G +AT ETYL P V+ DWDLQ
Sbjct: 342 LLEKFE--GRLWFIG-TATCETYLRCQVYHPSVETDWDLQ 378
>AT3G52490.1 | chr3:19455850-19458721 REVERSE LENGTH=816
Length = 815
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXDE-PPVSNSLMAAIKRSQANQRRNPDTFHF 127
+Q +AL+LCF V+L+RLP P +SN+L AA KR+QA+QRR
Sbjct: 64 LQCRALELCFNVALNRLPTSTGSPMLGVPTSPFPSISNALGAAFKRAQAHQRRGS----- 118
Query: 128 YHQAATAQTPA-AVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAI 175
+ Q P AVK+E+ L+++ILDDP VSRV EAGF S +K +
Sbjct: 119 ---IESQQQPILAVKIEVEQLIISILDDPSVSRVMREAGFSSPQVKTKV 164
>AT5G57130.1 | chr5:23145291-23149395 FORWARD LENGTH=1029
Length = 1028
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQRR---NPDTF 125
+Q +AL+LCF V+L+RLP +P ++N+L+AA+KR+QA+QRR
Sbjct: 86 LQCRALELCFNVALNRLPTVPGPMFH----GQPSLANALVAALKRAQAHQRRGCIEQQQQ 141
Query: 126 HFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIK 172
H AVKVEL LV++ILDDP VSRV EAGF S +K
Sbjct: 142 TQTHPQTQQTQLLAVKVELEQLVISILDDPSVSRVMREAGFNSTAVK 188
>AT4G29920.1 | chr4:14632653-14635885 REVERSE LENGTH=1018
Length = 1017
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 9/108 (8%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXDEPPVSNSLMAAIKRSQANQRRNPDTFHFY 128
+ +AL+LCF VSL+RLP +P +SN+L+AA+KR+QA+QRR
Sbjct: 75 LHCRALELCFNVSLNRLPTNPNPLFQT----QPSLSNALVAALKRAQAHQRRGC----VE 126
Query: 129 HQAATAQTP-AAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAI 175
Q + P AVKVEL LV++ILDDP VSRV EAG S +K I
Sbjct: 127 QQQSQQNQPFLAVKVELEQLVVSILDDPSVSRVMREAGLSSVSVKSNI 174
>AT4G30350.1 | chr4:14848031-14850973 FORWARD LENGTH=925
Length = 924
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 66/116 (56%), Gaps = 17/116 (14%)
Query: 69 VQLKALDLCFAVSLDRLPXXXXXXXXXXXXD--------EPPVSNSLMAAIKRSQANQRR 120
+Q +AL+LCF+V+L+RLP EP +SN+L AA+KR+QA+QRR
Sbjct: 67 LQCRALELCFSVALERLPTTSTTTTTTSSSSSSSPSQTQEPLLSNALTAALKRAQAHQRR 126
Query: 121 N-PDTFHFYHQAATAQTPAAVKVELSHLVLAILDDPVVSRVFAEAGFRSGDIKLAI 175
P+ Q AVKVEL L+++ILDDP VSRV EA F S +K AI
Sbjct: 127 GCPEQQQ--------QPLLAVKVELEQLIISILDDPSVSRVMREASFSSPAVKSAI 174
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,660,959
Number of extensions: 158627
Number of successful extensions: 510
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 490
Number of HSP's successfully gapped: 12
Length of query: 435
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 334
Effective length of database: 8,337,553
Effective search space: 2784742702
Effective search space used: 2784742702
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)