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Os11g0102800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.74 (0.0158) R2 : 0.334
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.618 (0.0414) R2dC : 0.328 R2C : 0.326
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0656 (0.0333) R2dN8 : 0.00732 R2N8 : 0.00581
σ : 0.299
deviance : 40.72
__
_____
C
peak time of C : 6.61
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.72 0.243 9.67 0.594 0.397 -0.982 0.347 1.9 0.307 8.19 16.67 251 -- --
29.44 0.253 9.71 0.281 0.446 -1.01 0.209 -- 0.212 8.4 14.52 205 -- --
27.06 0.242 9.68 0.599 0.41 -0.983 -- 1.87 0.304 8.27 16.8 224 -- --
29.53 0.253 9.71 0.291 0.386 -1.03 -- -- 0.218 8.09 12.87 264 -- --
32.45 0.265 9.68 0.668 -- -1.21 -- 1.68 0.35 -- 17.62 438 -- --
40.54 0.298 9.74 0.0686 0.616 -- 0.143 -- 0.074 6.66 -- -- -- --
40.59 0.298 9.74 0.0706 0.617 -- -- -- 0.0735 6.62 -- -- -- --
34.51 0.274 9.71 0.368 -- -1.31 -- -- 0.272 -- 8.896 455 -- --
31.53 0.262 9.72 -- 0.415 -0.885 -- -- 0.17 7.74 10.81 266 -- --
60.44 0.363 9.75 0.0853 -- -- -- -- 0.0859 -- -- -- -- --
40.72 0.299 9.74 -- 0.618 -- -- -- 0.0656 6.61 -- -- -- --
37.78 0.286 9.73 -- -- -1.18 -- -- 0.215 -- 11.29 428 -- --
60.63 0.363 9.76 -- -- -- -- -- 0.0765 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.96 temperature 10 270 > th dose dependent rect. 6 23
4 26.19 temperature 10 720 > th dose dependent rect. 23 20
7 26.36 temperature 15 720 > th dose dependent rect. 1 18
16 26.47 temperature 20 270 > th dose dependent rect. 15 23
23 26.68 temperature 20 270 > th dose dependent rect. 23 23
38 26.82 temperature 15 270 > th dose dependent no NA NA
76 27.16 radiation 1 14400 < th dose independent rect. 18 6
77 27.16 radiation 1 14400 < th dose independent rect. 18 8
78 27.17 radiation 1 14400 < th dose independent rect. 18 3
82 27.18 radiation 1 14400 < th dose independent rect. 18 1
95 27.28 temperature 20 270 > th dose dependent rect. 12 23
101 27.32 temperature 30 270 < th dose dependent no NA NA
106 27.34 temperature 30 270 < th dose dependent rect. 22 23
107 27.35 temperature 30 270 < th dose dependent rect. 8 23
108 27.35 temperature 30 270 < th dose dependent rect. 10 23
113 27.39 temperature 30 270 < th dose dependent rect. 1 23
116 27.43 wind 9 43200 > th dose independent rect. 19 2
119 27.44 wind 9 43200 > th dose dependent rect. 19 2
133 27.50 temperature 10 720 > th dose dependent rect. 16 21
148 27.57 temperature 30 270 < th dose dependent rect. 14 23
155 27.62 wind 9 43200 < th dose independent rect. 19 2
185 27.69 radiation 1 14400 < th dose dependent rect. 18 1
199 27.72 radiation 1 14400 > th dose independent rect. 17 2
217 27.73 temperature 30 270 < th dose dependent rect. 17 23
227 27.78 wind 9 43200 > th dose dependent rect. 18 5
239 27.79 radiation 1 14400 < th dose dependent rect. 18 12
251 27.83 temperature 20 720 > th dose dependent sin 3 NA
274 27.88 temperature 20 720 > th dose dependent rect. 21 16
276 27.88 temperature 10 720 > th dose dependent rect. 16 19
295 27.94 wind 9 43200 > th dose independent rect. 18 7
318 27.99 wind 9 43200 > th dose dependent rect. 18 12
321 27.99 temperature 30 30 < th dose dependent rect. 5 23
322 28.00 wind 9 43200 > th dose dependent rect. 18 7
352 28.07 radiation 1 14400 < th dose dependent rect. 4 2
416 28.16 wind 9 43200 < th dose independent rect. 18 7
468 28.24 temperature 20 1440 > th dose dependent rect. 17 2
472 28.25 wind 9 43200 > th dose independent rect. 18 12
479 28.26 temperature 20 1440 > th dose dependent rect. 17 4
487 28.28 temperature 20 1440 > th dose dependent rect. 16 6
535 28.36 wind 9 43200 < th dose independent rect. 18 12
552 28.38 wind 5 43200 > th dose dependent rect. 5 16
620 28.47 wind 1 43200 > th dose dependent rect. 20 1
643 28.50 wind 9 43200 < th dose dependent rect. 20 1
644 28.50 temperature 30 1440 < th dose dependent rect. 17 2
653 28.51 radiation 1 14400 < th dose dependent sin 12 NA
665 28.51 temperature 30 720 < th dose dependent rect. 3 18
709 28.55 wind 5 43200 > th dose independent rect. 9 12
715 28.55 radiation 1 14400 > th dose dependent rect. 18 11
734 28.57 wind 5 43200 > th dose independent sin 21 NA
735 28.57 wind 5 43200 < th dose independent rect. 8 13
737 28.57 wind 7 43200 > th dose independent rect. 14 21
739 28.57 temperature 10 1440 > th dose dependent rect. 17 2
755 28.58 wind 5 43200 > th dose independent rect. 11 14
768 28.59 wind 7 43200 < th dose independent rect. 23 22
776 28.59 wind 5 43200 > th dose dependent rect. 5 20
777 28.59 wind 5 43200 > th dose dependent rect. 24 21
790 28.60 wind 7 43200 < th dose independent rect. 13 21
805 28.61 wind 5 43200 < th dose independent sin 21 NA
814 28.61 wind 7 43200 > th dose independent rect. 23 22
858 28.63 wind 5 43200 > th dose dependent sin 22 NA
903 28.65 temperature 20 1440 > th dose dependent sin 16 NA
953 28.67 wind 3 43200 > th dose dependent rect. 9 7
964 28.68 wind 5 43200 > th dose independent rect. 9 8