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Os11g0102700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Peptidase C48, SUMO/Sentrin/Ubl1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0195) R2 : 0.101
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.295 (0.0411) R2dN8 : 0.131 R2N8 : 0.101
σ : 0.368
deviance : 62.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.33 0.25 12.5 0.661 0.571 -0.543 0.347 -0.102 0.39 0.966 80 1358 -- --
28.34 0.248 12.5 0.667 0.57 -0.546 0.344 -- 0.391 0.959 80 1355 -- --
28.83 0.25 12.5 0.652 0.57 -0.535 -- -0.055 0.39 1.02 79.44 1356 -- --
28.75 0.25 12.5 0.668 0.571 -0.544 -- -- 0.382 1.02 79 1350 -- --
38.69 0.291 12.5 0.681 -- -0.321 -- -0.235 0.354 -- 78 1661 -- --
32.08 0.266 12.5 0.65 0.54 -- 0.296 -- 0.359 0.809 -- -- -- --
32.45 0.267 12.5 0.639 0.54 -- -- -- 0.358 0.868 -- -- -- --
39.05 0.292 12.5 0.687 -- -0.322 -- -- 0.356 -- 78 1661 -- --
40.08 0.295 12.5 -- 0.579 -0.494 -- -- 0.315 1.07 80.14 1353 -- --
50.62 0.332 12.5 0.659 -- -- -- -- 0.368 -- -- -- -- --
43.22 0.308 12.5 -- 0.55 -- -- -- 0.287 0.919 -- -- -- --
51.15 0.334 12.5 -- -- -0.308 -- -- 0.306 -- 83 1675 -- --
62.08 0.368 12.5 -- -- -- -- -- 0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.20 precipitation 0.1 14400 > th dose dependent rect. 17 1
2 27.40 wind 9.0 14400 < th dose independent rect. 10 1
3 27.52 wind 7.0 4320 < th dose independent rect. 20 8
4 27.54 wind 9.0 14400 > th dose independent rect. 10 1
5 27.61 wind 7.0 4320 > th dose independent rect. 20 8
6 27.69 atmosphere 1005.0 14400 < th dose independent rect. 23 1
7 27.70 humidity 80.0 1440 < th dose independent rect. 21 18
10 27.74 wind 7.0 14400 > th dose dependent rect. 10 1
11 27.74 wind 3.0 43200 < th dose dependent rect. 23 6
16 27.78 temperature 20.0 4320 > th dose independent rect. 20 3
19 27.79 wind 5.0 4320 > th dose dependent rect. 20 8
20 27.81 precipitation 0.1 14400 > th dose independent rect. 17 1
22 27.83 temperature 20.0 4320 < th dose independent rect. 20 3
24 27.84 wind 9.0 14400 < th dose independent rect. 8 3
38 27.93 temperature 20.0 4320 > th dose independent rect. 21 1
40 27.94 humidity 80.0 1440 > th dose independent rect. 21 19
48 27.97 humidity 70.0 1440 > th dose dependent rect. 24 16
66 28.02 wind 5.0 4320 > th dose dependent rect. 20 4
75 28.05 precipitation 0.1 14400 < th dose independent rect. 17 1
77 28.05 precipitation 0.1 14400 < th dose dependent rect. 17 1
101 28.11 temperature 25.0 1440 < th dose dependent rect. 20 1
119 28.15 temperature 25.0 1440 < th dose dependent rect. 17 5
122 28.16 atmosphere 1005.0 14400 > th dose independent rect. 23 1
146 28.21 humidity 80.0 1440 < th dose independent sin 5 NA
151 28.21 wind 7.0 14400 > th dose dependent rect. 12 1
155 28.22 atmosphere 1005.0 14400 > th dose independent rect. 11 1
169 28.24 wind 7.0 4320 > th dose independent rect. 20 3
199 28.26 humidity 70.0 1440 > th dose dependent sin 4 NA
209 28.27 humidity 70.0 1440 > th dose dependent rect. 11 1
223 28.28 wind 7.0 14400 > th dose dependent rect. 10 3
228 28.29 temperature 20.0 1440 > th dose independent rect. 4 19
229 28.29 temperature 20.0 270 > th dose independent rect. 5 22
243 28.31 atmosphere 1005.0 14400 > th dose independent rect. 4 1
260 28.33 humidity 80.0 1440 > th dose independent sin 5 NA
276 28.34 humidity 80.0 1440 > th dose independent rect. 11 1
277 28.34 humidity 80.0 1440 < th dose independent rect. 11 1
288 28.35 temperature 20.0 1440 > th dose independent sin 16 NA
294 28.35 temperature 20.0 1440 > th dose independent rect. 14 16
371 28.40 atmosphere 1005.0 14400 < th dose independent rect. 11 1
376 28.40 temperature 20.0 1440 > th dose independent rect. 18 12
392 28.41 atmosphere 1005.0 14400 < th dose independent rect. 3 2
396 28.41 temperature 20.0 1440 < th dose independent rect. 4 18
443 28.43 temperature 20.0 1440 > th dose dependent rect. 24 1
456 28.44 atmosphere 1005.0 14400 > th dose independent rect. 23 15
473 28.45 atmosphere 1005.0 14400 > th dose independent rect. 23 6
477 28.45 atmosphere 1005.0 14400 > th dose independent rect. 2 12
483 28.45 atmosphere 1005.0 14400 < th dose independent rect. 11 19
486 28.45 temperature 25.0 1440 < th dose dependent sin 16 NA
512 28.46 atmosphere 1005.0 14400 < th dose independent rect. 21 20
535 28.47 atmosphere 1005.0 14400 < th dose independent rect. 16 13
539 28.47 temperature 20.0 1440 < th dose independent rect. 14 16
542 28.47 atmosphere 1005.0 14400 < th dose independent rect. 21 18
550 28.47 humidity 80.0 1440 < th dose independent rect. 9 23
552 28.47 wind 3.0 43200 < th dose dependent rect. 24 3
563 28.48 atmosphere 1005.0 14400 < th dose independent sin 12 NA
583 28.48 atmosphere 1005.0 14400 < th dose independent rect. 22 16
605 28.49 temperature 20.0 1440 < th dose independent sin 16 NA
606 28.49 wind 1.0 43200 > th dose independent rect. 5 1
700 28.51 temperature 20.0 1440 < th dose independent rect. 18 12
776 28.52 temperature 20.0 1440 > th dose independent rect. 18 23
832 28.53 temperature 20.0 270 > th dose independent rect. 15 23
847 28.54 humidity 80.0 1440 < th dose independent no NA NA
848 28.54 atmosphere 1005.0 14400 > th dose independent sin 5 NA
878 28.54 temperature 20.0 1440 > th dose independent rect. 18 18
882 28.54 humidity 80.0 720 > th dose independent rect. 10 19
898 28.54 atmosphere 1005.0 14400 > th dose independent rect. 16 22
915 28.55 temperature 20.0 1440 > th dose independent no NA NA
921 28.55 atmosphere 995.0 14400 > th dose independent rect. 18 1
959 28.55 atmosphere 1005.0 14400 < th dose independent rect. 16 22
964 28.55 humidity 80.0 1440 > th dose independent rect. 9 23
966 28.55 humidity 80.0 1440 < th dose independent rect. 13 23