Os11g0102500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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Os11g0102500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alcohol dehydrogenase superfamily, zinc-containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.52 | 0.334 | 14.1 | 0.114 | 0.859 | -0.351 | 0.301 | 0.0558 | 0.101 | 21.1 | 25.7 | 224 | -- | -- |
| 50.53 | 0.331 | 14.1 | 0.125 | 0.861 | -0.35 | 0.298 | -- | 0.104 | 21.1 | 25.7 | 224 | -- | -- |
| 50.82 | 0.332 | 14.1 | 0.112 | 0.863 | -0.338 | -- | 0.034 | 0.107 | 21 | 25.7 | 224 | -- | -- |
| 50.82 | 0.332 | 14.1 | 0.121 | 0.865 | -0.336 | -- | -- | 0.11 | 21 | 25.75 | 224 | -- | -- |
| 78.75 | 0.413 | 14.1 | -0.134 | -- | -0.802 | -- | 0.489 | -0.0278 | -- | 26.3 | 557 | -- | -- |
| 55.88 | 0.35 | 14.1 | 0.225 | 1.01 | -- | 0.149 | -- | 0.233 | 20.1 | -- | -- | -- | -- |
| 55.95 | 0.35 | 14.1 | 0.221 | 1.01 | -- | -- | -- | 0.233 | 20.1 | -- | -- | -- | -- |
| 78.46 | 0.413 | 14.1 | -0.00641 | -- | -0.772 | -- | -- | -0.00966 | -- | 25.82 | 517 | -- | -- |
| 51.2 | 0.333 | 14.1 | -- | 0.863 | -0.342 | -- | -- | 0.0968 | 21 | 25.77 | 224 | -- | -- |
| 111.36 | 0.493 | 14.1 | 0.211 | -- | -- | -- | -- | 0.22 | -- | -- | -- | -- | -- |
| 57.23 | 0.354 | 14.1 | -- | 1 | -- | -- | -- | 0.208 | 20.1 | -- | -- | -- | -- |
| 78.46 | 0.413 | 14.1 | -- | -- | -0.772 | -- | -- | -0.00879 | -- | 25.82 | 517 | -- | -- |
| 112.54 | 0.495 | 14.1 | -- | -- | -- | -- | -- | 0.197 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.82 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 5 | 43.35 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 20 | 16 |
| 9 | 43.56 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 9 | 6 |
| 22 | 44.07 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 4 |
| 61 | 44.67 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 97 | 45.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 166 | 45.68 | temperature | 30.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 228 | 46.03 | temperature | 30.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 268 | 46.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 274 | 46.38 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 275 | 46.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 301 | 46.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 338 | 46.69 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 387 | 46.84 | temperature | 10.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 422 | 46.95 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 449 | 47.05 | humidity | 90.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 464 | 47.07 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 499 | 47.18 | humidity | 90.0 | 30 | < th | dose independent | rect. | 2 | 7 |
| 674 | 47.72 | temperature | 25.0 | 270 | < th | dose independent | sin | 3 | NA |
| 777 | 48.00 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 826 | 48.12 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 6 |
| 845 | 48.17 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 862 | 48.21 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 863 | 48.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 18 |
| 867 | 48.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 868 | 48.22 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 885 | 48.25 | temperature | 25.0 | 270 | > th | dose independent | sin | 5 | NA |
| 910 | 48.29 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 9 | 6 |
| 953 | 48.33 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 962 | 48.34 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 2 | 6 |
| 994 | 48.39 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 6 |