Os10g0579300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : NADH:ubiquinone oxidoreductase 17.2 kD subunit family protein.
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Os10g0579300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : NADH:ubiquinone oxidoreductase 17.2 kD subunit family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 31.14 | 0.262 | 12 | -0.566 | 0.665 | 0.748 | 0.12 | 0.117 | -0.178 | 11.1 | 78 | 752 | -- | -- |
| 30.71 | 0.258 | 12 | -0.572 | 0.694 | 0.803 | 0.0915 | -- | -0.186 | 11.4 | 76.97 | 814 | -- | -- |
| 30.26 | 0.256 | 12 | -0.578 | 0.702 | 0.826 | -- | 0.105 | -0.211 | 11.7 | 75.71 | 881 | -- | -- |
| 30.28 | 0.256 | 12 | -0.588 | 0.7 | 0.825 | -- | -- | -0.212 | 11.7 | 75.76 | 876 | -- | -- |
| 40.86 | 0.299 | 12 | -0.549 | -- | 0.35 | -- | 0.144 | -0.168 | -- | 77.14 | 3190 | -- | -- |
| 41.98 | 0.304 | 12 | -0.503 | 0.455 | -- | 0.0487 | -- | -0.168 | 13.8 | -- | -- | -- | -- |
| 41.99 | 0.303 | 12 | -0.501 | 0.455 | -- | -- | -- | -0.168 | 13.8 | -- | -- | -- | -- |
| 40.99 | 0.299 | 12 | -0.554 | -- | 0.35 | -- | -- | -0.17 | -- | 77.14 | 3190 | -- | -- |
| 39.41 | 0.292 | 12 | -- | 0.714 | 0.819 | -- | -- | -0.177 | 11.9 | 75.01 | 905 | -- | -- |
| 54.55 | 0.345 | 12 | -0.52 | -- | -- | -- | -- | -0.178 | -- | -- | -- | -- | -- |
| 48.61 | 0.326 | 12 | -- | 0.464 | -- | -- | -- | -0.112 | 13.8 | -- | -- | -- | -- |
| 49.08 | 0.327 | 12 | -- | -- | 0.337 | -- | -- | -0.109 | -- | 77.14 | 3190 | -- | -- |
| 61.69 | 0.367 | 12 | -- | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.56 | humidity | 80 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 2 | 30.67 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 13 |
| 6 | 30.77 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 14 |
| 7 | 30.80 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 10 | 30.98 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 14 | 31.10 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 21 |
| 16 | 31.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 20 | 31.16 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 20 |
| 26 | 31.22 | humidity | 80 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 28 | 31.24 | humidity | 70 | 720 | > th | dose dependent | sin | 22 | NA |
| 35 | 31.31 | humidity | 80 | 720 | > th | dose independent | sin | 22 | NA |
| 53 | 31.48 | humidity | 80 | 720 | < th | dose independent | rect. | 19 | 22 |
| 58 | 31.50 | humidity | 80 | 1440 | < th | dose independent | sin | 0 | NA |
| 64 | 31.54 | humidity | 80 | 720 | < th | dose independent | sin | 22 | NA |
| 67 | 31.58 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 20 |
| 74 | 31.61 | humidity | 80 | 720 | < th | dose independent | rect. | 3 | 18 |
| 78 | 31.62 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 129 | 31.71 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 20 |
| 163 | 31.77 | humidity | 70 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 173 | 31.80 | humidity | 80 | 720 | < th | dose independent | rect. | 7 | 19 |
| 192 | 31.82 | humidity | 70 | 720 | > th | dose dependent | rect. | 2 | 18 |
| 195 | 31.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 225 | 31.86 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 23 |
| 415 | 32.08 | humidity | 80 | 720 | < th | dose independent | no | NA | NA |
| 421 | 32.09 | humidity | 80 | 720 | < th | dose independent | rect. | 10 | 15 |
| 483 | 32.17 | humidity | 80 | 720 | > th | dose independent | no | NA | NA |
| 505 | 32.19 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 23 |
| 651 | 32.33 | humidity | 80 | 720 | > th | dose independent | rect. | 10 | 23 |
| 658 | 32.34 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 23 |
| 717 | 32.40 | humidity | 80 | 720 | > th | dose independent | rect. | 13 | 23 |
| 914 | 32.62 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 929 | 32.63 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 948 | 32.64 | radiation | 20 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 973 | 32.65 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 976 | 32.65 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 14 |