Os10g0577700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : CS domain containing protein.
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Os10g0577700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : CS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.19 | 0.388 | 11.6 | 0.327 | 1.03 | -0.689 | -0.0674 | 0.749 | -0.613 | 21.1 | 19.57 | 1401 | -- | -- |
| 69.38 | 0.388 | 11.6 | 0.383 | 1.01 | -0.668 | -0.115 | -- | -0.582 | 21 | 19.58 | 1364 | -- | -- |
| 68.15 | 0.384 | 11.6 | 0.335 | 1.02 | -0.682 | -- | 0.887 | -0.607 | 21 | 19.58 | 1339 | -- | -- |
| 69.41 | 0.388 | 11.6 | 0.381 | 1.01 | -0.679 | -- | -- | -0.589 | 21 | 19.57 | 1364 | -- | -- |
| 86.06 | 0.432 | 11.6 | 0.165 | -- | -1.42 | -- | 0.871 | -0.679 | -- | 12.27 | 1037 | -- | -- |
| 86.38 | 0.436 | 11.6 | 0.447 | 1.07 | -- | -0.0443 | -- | -0.439 | 21.3 | -- | -- | -- | -- |
| 86.39 | 0.435 | 11.6 | 0.449 | 1.07 | -- | -- | -- | -0.439 | 21.3 | -- | -- | -- | -- |
| 86.86 | 0.434 | 11.6 | 0.197 | -- | -1.4 | -- | -- | -0.698 | -- | 12.27 | 1024 | -- | -- |
| 73.46 | 0.399 | 11.6 | -- | 1.01 | -0.69 | -- | -- | -0.621 | 21.1 | 19.57 | 1361 | -- | -- |
| 152.94 | 0.578 | 11.5 | 0.454 | -- | -- | -- | -- | -0.443 | -- | -- | -- | -- | -- |
| 91.7 | 0.448 | 11.6 | -- | 1.07 | -- | -- | -- | -0.489 | 21.3 | -- | -- | -- | -- |
| 87.07 | 0.435 | 11.6 | -- | -- | -1.41 | -- | -- | -0.727 | -- | 12.26 | 1034 | -- | -- |
| 158.37 | 0.587 | 11.5 | -- | -- | -- | -- | -- | -0.494 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.11 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 2 | 63.39 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 4 | 64.27 | temperature | 30 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 8 | 64.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 9 | 64.60 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 11 | 64.68 | temperature | 10 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 142 | 65.57 | temperature | 30 | 14400 | < th | dose dependent | sin | 23 | NA |
| 155 | 65.61 | radiation | 20 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 194 | 65.69 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 20 |
| 207 | 65.72 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 214 | 65.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 223 | 65.74 | temperature | 30 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 273 | 65.83 | humidity | 90 | 14400 | > th | dose independent | sin | 16 | NA |
| 332 | 65.90 | temperature | 25 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 339 | 65.91 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 348 | 65.91 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 352 | 65.92 | temperature | 10 | 14400 | > th | dose dependent | sin | 22 | NA |
| 365 | 65.94 | humidity | 90 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 373 | 65.95 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 16 |
| 388 | 65.96 | temperature | 25 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 498 | 66.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 546 | 66.10 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 567 | 66.12 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 22 |
| 601 | 66.15 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 619 | 66.17 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 710 | 66.24 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 715 | 66.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 769 | 66.28 | temperature | 10 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 783 | 66.29 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 797 | 66.30 | humidity | 90 | 14400 | < th | dose independent | rect. | 7 | 18 |
| 854 | 66.35 | temperature | 10 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 876 | 66.37 | wind | 3 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 896 | 66.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 8 |