Os10g0577400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0577400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.29 | 0.408 | 3 | -1.41 | 0.181 | 0.779 | 0.211 | -5.51 | 0.072 | 7.8 | 30.2 | 5779 | -- | -- |
| 81.11 | 0.419 | 2.88 | -0.246 | 0.234 | 0.248 | 0.246 | -- | 0.0453 | 7.98 | 22.3 | 4984 | -- | -- |
| 75.37 | 0.404 | 2.99 | -1.38 | 0.178 | 0.775 | -- | -5.53 | 0.0823 | 7.65 | 30.41 | 5766 | -- | -- |
| 80.84 | 0.419 | 2.88 | -0.233 | 0.243 | 0.242 | -- | -- | 0.0731 | 8.43 | 23.35 | 5051 | -- | -- |
| 77.02 | 0.409 | 2.99 | -1.36 | -- | 0.773 | -- | -5.46 | 0.0969 | -- | 30.5 | 5755 | -- | -- |
| 82.89 | 0.427 | 2.86 | -0.116 | 0.234 | -- | 0.0444 | -- | 0.162 | 8.2 | -- | -- | -- | -- |
| 82.9 | 0.426 | 2.86 | -0.115 | 0.234 | -- | -- | -- | 0.162 | 8.19 | -- | -- | -- | -- |
| 83.99 | 0.427 | 2.88 | -0.228 | -- | 0.229 | -- | -- | 0.0728 | -- | 23.3 | 4673 | -- | -- |
| 82.08 | 0.422 | 2.87 | -- | 0.238 | 0.168 | -- | -- | 0.123 | 8.44 | 23.4 | 5023 | -- | -- |
| 85.93 | 0.433 | 2.86 | -0.113 | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
| 83.25 | 0.427 | 2.86 | -- | 0.234 | -- | -- | -- | 0.175 | 8.23 | -- | -- | -- | -- |
| 85.15 | 0.43 | 2.87 | -- | -- | 0.162 | -- | -- | 0.129 | -- | 23.4 | 4670 | -- | -- |
| 86.27 | 0.434 | 2.86 | -- | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 4 | 74.15 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 7 | 74.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 8 | 74.15 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 11 | 74.15 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 12 | 74.16 | wind | 3.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 13 | 74.16 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 14 | 74.17 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 15 | 74.19 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 16 | 74.19 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 19 | 74.21 | humidity | 80.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 21 | 74.21 | wind | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 25 | 74.24 | humidity | 70.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 26 | 74.24 | radiation | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 28 | 74.26 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 29 | 74.27 | wind | 5.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 33 | 74.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 35 | 74.28 | temperature | 30.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 36 | 74.28 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 38 | 74.28 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 1 |
| 39 | 74.28 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 8 | 1 |
| 42 | 74.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 1 |
| 43 | 74.28 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 45 | 74.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 49 | 74.30 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 52 | 74.31 | wind | 9.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 53 | 74.32 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 55 | 74.33 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 8 | 1 |
| 69 | 74.49 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 71 | 74.56 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 84 | 74.80 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 8 | 1 |
| 105 | 74.94 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 23 |
| 107 | 74.94 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 110 | 75.02 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 128 | 75.58 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 135 | 75.75 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 152 | 76.64 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 194 | 77.49 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 199 | 77.56 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 3 |
| 228 | 77.73 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 245 | 77.82 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 249 | 77.86 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 272 | 78.05 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 275 | 78.07 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 279 | 78.09 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 287 | 78.14 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 3 |
| 327 | 78.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 336 | 78.23 | wind | 7.0 | 90 | > th | dose dependent | rect. | 19 | 2 |
| 345 | 78.27 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 7 |
| 373 | 78.29 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 374 | 78.30 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 397 | 78.33 | temperature | 30.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 401 | 78.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 7 |
| 445 | 78.38 | temperature | 30.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 450 | 78.38 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 551 | 78.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 554 | 78.45 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 5 |
| 599 | 78.46 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 657 | 78.48 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 16 | 23 |
| 658 | 78.49 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 754 | 78.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 755 | 78.49 | wind | 5.0 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 767 | 78.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 12 |
| 770 | 78.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 787 | 78.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 788 | 78.51 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 19 | 23 |
| 800 | 78.53 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 924 | 78.53 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 983 | 78.58 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |