Os10g0576000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0576000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.95 | 0.155 | 13.9 | -0.397 | 0.218 | 0.0843 | 0.0678 | -0.807 | -0.00622 | 20.9 | 18.91 | 2259 | -- | -- |
| 11.43 | 0.157 | 13.9 | -0.333 | 0.234 | 0.266 | 0.0596 | -- | -0.00928 | 20.6 | 18.4 | 5425 | -- | -- |
| 10.96 | 0.154 | 13.9 | -0.398 | 0.217 | 0.0868 | -- | -0.793 | -0.0062 | 20.9 | 18.91 | 2267 | -- | -- |
| 11.27 | 0.156 | 13.9 | -0.392 | 0.222 | 0.332 | -- | -- | 0.00155 | 20.8 | 18.4 | 5415 | -- | -- |
| 13.66 | 0.172 | 13.9 | -0.397 | -- | 0.132 | -- | -0.688 | -0.0085 | -- | 18.9 | 2321 | -- | -- |
| 13.02 | 0.169 | 13.9 | -0.184 | 0.224 | -- | -0.00356 | -- | 0.064 | 21 | -- | -- | -- | -- |
| 13.02 | 0.169 | 13.9 | -0.184 | 0.225 | -- | -- | -- | 0.064 | 21 | -- | -- | -- | -- |
| 14 | 0.174 | 13.9 | -0.423 | -- | 0.426 | -- | -- | -0.0253 | -- | 18 | 6737 | -- | -- |
| 13.53 | 0.171 | 13.9 | -- | 0.221 | 0.152 | -- | -- | 0.0698 | 20.8 | 17.1 | 4018 | -- | -- |
| 15.92 | 0.186 | 13.9 | -0.183 | -- | -- | -- | -- | 0.0626 | -- | -- | -- | -- | -- |
| 13.91 | 0.174 | 13.9 | -- | 0.225 | -- | -- | -- | 0.0844 | 21 | -- | -- | -- | -- |
| 15.7 | 0.185 | 13.9 | -- | -- | 0.145 | -- | -- | 0.0234 | -- | 25.15 | 578 | -- | -- |
| 16.81 | 0.191 | 13.9 | -- | -- | -- | -- | -- | 0.0829 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 16 |
| 5 | 10.63 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 11 | 10.64 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 16 | 10.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 17 |
| 21 | 10.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 15 |
| 30 | 10.66 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 12 |
| 43 | 10.67 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 56 | 10.67 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 20 |
| 67 | 10.68 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 78 | 10.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 18 |
| 101 | 10.69 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 151 | 10.70 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 162 | 10.70 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 180 | 10.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 213 | 10.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 241 | 10.74 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 264 | 10.75 | humidity | 90.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 266 | 10.75 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 267 | 10.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 274 | 10.75 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 285 | 10.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 8 |
| 295 | 10.76 | humidity | 90.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 300 | 10.76 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 301 | 10.76 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 302 | 10.76 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 304 | 10.76 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 306 | 10.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 336 | 10.77 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 6 | 9 |
| 338 | 10.77 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 12 |
| 404 | 10.78 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 8 |
| 426 | 10.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 429 | 10.79 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 440 | 10.79 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 443 | 10.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 489 | 10.80 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 490 | 10.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 491 | 10.80 | wind | 7.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 493 | 10.80 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 544 | 10.81 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 545 | 10.81 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 559 | 10.81 | wind | 9.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 568 | 10.81 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 572 | 10.81 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 573 | 10.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 630 | 10.82 | wind | 7.0 | 43200 | > th | dose independent | rect. | 22 | 8 |
| 647 | 10.82 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 654 | 10.82 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 663 | 10.82 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 719 | 10.82 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 23 |
| 722 | 10.83 | wind | 7.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 727 | 10.83 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 753 | 10.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 759 | 10.83 | radiation | 1.0 | 14400 | < th | dose dependent | no | NA | NA |
| 778 | 10.83 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 22 | 7 |
| 840 | 10.83 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 14 | 19 |
| 892 | 10.83 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 908 | 10.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 919 | 10.84 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 935 | 10.84 | wind | 7.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 938 | 10.84 | wind | 7.0 | 43200 | > th | dose independent | rect. | 22 | 15 |
| 939 | 10.84 | wind | 7.0 | 43200 | < th | dose independent | rect. | 22 | 15 |
| 987 | 10.84 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 7 | 15 |
| 990 | 10.84 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |