Os10g0575200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Rme-8 homologue (Fragment).
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Os10g0575200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Rme-8 homologue (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.56 | 0.26 | 10.8 | 1.44 | 0.137 | -0.214 | -0.414 | 1.76 | 0.564 | 23.2 | 21.3 | 1513 | -- | -- |
| 32.12 | 0.264 | 10.8 | 1.04 | 0.137 | -0.309 | -0.425 | -- | 0.5 | 23.5 | 14.61 | 18867 | -- | -- |
| 31.24 | 0.26 | 10.8 | 1.45 | 0.143 | -0.217 | -- | 1.79 | 0.564 | 22.5 | 21.26 | 1614 | -- | -- |
| 32.59 | 0.266 | 10.8 | 1.11 | 0.148 | -0.312 | -- | -- | 0.52 | 22.8 | 13.87 | 17593 | -- | -- |
| 32.48 | 0.265 | 10.8 | 1.45 | -- | -0.207 | -- | 1.76 | 0.562 | -- | 21.24 | 1566 | -- | -- |
| 33.58 | 0.272 | 10.8 | 0.857 | 0.134 | -- | -0.388 | -- | 0.387 | 23.2 | -- | -- | -- | -- |
| 34.21 | 0.274 | 10.8 | 0.874 | 0.137 | -- | -- | -- | 0.389 | 22.8 | -- | -- | -- | -- |
| 33.81 | 0.271 | 10.8 | 1.12 | -- | -0.319 | -- | -- | 0.51 | -- | 12.7 | 18876 | -- | -- |
| 41.93 | 0.302 | 10.9 | -- | 0.129 | 0.567 | -- | -- | 0.123 | 22.7 | -1.524 | 47520 | -- | -- |
| 35.38 | 0.278 | 10.8 | 0.877 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 54.34 | 0.345 | 10.9 | -- | 0.145 | -- | -- | -- | 0.292 | 23.2 | -- | -- | -- | -- |
| 42.53 | 0.304 | 10.9 | -- | -- | 0.551 | -- | -- | 0.108 | -- | 17.23 | 47520 | -- | -- |
| 55.64 | 0.348 | 10.9 | -- | -- | -- | -- | -- | 0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.06 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 2 | 29.18 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 3 | 29.35 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 4 | 29.35 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 4 |
| 8 | 29.42 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 10 | 29.45 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 18 | 29.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 39 | 29.78 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 45 | 29.80 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 59 | 29.87 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 60 | 29.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 62 | 29.88 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 73 | 29.91 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 87 | 29.93 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 104 | 29.95 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 121 | 29.96 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 166 | 29.98 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 177 | 29.99 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 208 | 30.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 237 | 30.01 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 272 | 30.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 280 | 30.02 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 324 | 30.03 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 381 | 30.04 | atmosphere | 1010.0 | 43200 | < th | dose dependent | no | NA | NA |
| 439 | 30.04 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 485 | 30.05 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 15 | 21 |
| 551 | 30.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 600 | 30.08 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 16 | NA |
| 647 | 30.09 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 695 | 30.10 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 750 | 30.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 791 | 30.12 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 798 | 30.12 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 854 | 30.13 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 918 | 30.14 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 989 | 30.15 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 995 | 30.15 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |