Os10g0575000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor MYC7E (Fragment).
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Os10g0575000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transcription factor MYC7E (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.39 | 0.377 | 11 | 1.97 | 0.532 | -1.48 | -0.901 | 1.52 | 0.728 | 18.2 | 21.46 | 282 | -- | -- |
| 65.87 | 0.378 | 11.1 | 1.74 | 0.48 | -1.38 | -0.65 | -- | 0.666 | 18.2 | 20.31 | 285 | -- | -- |
| 66.1 | 0.379 | 11 | 1.98 | 0.555 | -1.52 | -- | 1.46 | 0.718 | 18 | 21.96 | 276 | -- | -- |
| 66.46 | 0.38 | 11.1 | 1.7 | 0.514 | -1.39 | -- | -- | 0.644 | 18.1 | 21.77 | 275 | -- | -- |
| 74.78 | 0.405 | 11.1 | 1.68 | -- | -1.1 | -- | 0.507 | 0.603 | -- | 21.96 | 276 | -- | -- |
| 100.84 | 0.471 | 11.1 | 1.38 | 0.0275 | -- | -1 | -- | 0.417 | 19 | -- | -- | -- | -- |
| 101.35 | 0.471 | 11.1 | 1.39 | 0.184 | -- | -- | -- | 0.411 | 0.658 | -- | -- | -- | -- |
| 74.41 | 0.402 | 11.1 | 1.63 | -- | -1.11 | -- | -- | 0.596 | -- | 20.03 | 92 | -- | -- |
| 136.29 | 0.544 | 11.1 | -- | 0.303 | -0.963 | -- | -- | 0.359 | 17.6 | 24.31 | 112 | -- | -- |
| 103.47 | 0.475 | 11.1 | 1.4 | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
| 152.28 | 0.577 | 11.2 | -- | 0.206 | -- | -- | -- | 0.256 | 0.979 | -- | -- | -- | -- |
| 139.1 | 0.551 | 11.1 | -- | -- | -0.781 | -- | -- | 0.327 | -- | 24.31 | 112 | -- | -- |
| 154.92 | 0.581 | 11.2 | -- | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 3 | 63.16 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 7 | 63.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 19 | 64.32 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 46 | 64.97 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 50 | 65.03 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 55 | 65.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 81 | 65.49 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 90 | 65.56 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 149 | 66.23 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 158 | 66.29 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 163 | 66.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 293 | 67.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 345 | 67.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 351 | 67.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 356 | 67.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 431 | 68.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 432 | 68.18 | temperature | 20 | 270 | > th | dose dependent | sin | 23 | NA |
| 528 | 68.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 660 | 68.96 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 668 | 68.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 857 | 69.66 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 979 | 70.02 | temperature | 10 | 10 | > th | dose dependent | sin | 19 | NA |
| 997 | 70.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |