Os10g0573800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os10g0573800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 142.45 | 0.561 | 7.51 | 0.951 | 2.93 | -1.23 | 1.69 | -1.23 | 0.147 | 7.89 | 20.97 | 1371 | -- | -- |
| 145.26 | 0.561 | 7.47 | 1.21 | 2.92 | -1.09 | 1.71 | -- | 0.198 | 7.88 | 21 | 1304 | -- | -- |
| 150.66 | 0.572 | 7.51 | 1 | 2.92 | -1.26 | -- | -1.27 | 0.143 | 7.87 | 20.89 | 1329 | -- | -- |
| 153.77 | 0.578 | 7.47 | 1.26 | 2.92 | -1.1 | -- | -- | 0.204 | 7.86 | 20.94 | 1315 | -- | -- |
| 598.08 | 1.14 | 7.58 | 1.08 | -- | -1.52 | -- | -1.76 | 0.266 | -- | 21.1 | 2124 | -- | -- |
| 175.69 | 0.621 | 7.53 | 0.752 | 2.93 | -- | 1.76 | -- | -0.0728 | 7.95 | -- | -- | -- | -- |
| 184.83 | 0.637 | 7.53 | 0.8 | 2.93 | -- | -- | -- | -0.0745 | 7.95 | -- | -- | -- | -- |
| 458.21 | 0.997 | 7.36 | 1.65 | -- | -1.82 | -- | -- | 1.06 | -- | 25.7 | 571 | -- | -- |
| 186.84 | 0.637 | 7.51 | -- | 2.92 | -0.586 | -- | -- | 0.0297 | 7.84 | 22.39 | 1157 | -- | -- |
| 651.81 | 1.19 | 7.61 | 0.83 | -- | -- | -- | -- | -0.0362 | -- | -- | -- | -- | -- |
| 201.69 | 0.664 | 7.55 | -- | 2.93 | -- | -- | -- | -0.164 | 7.93 | -- | -- | -- | -- |
| 482.13 | 1.02 | 7.52 | -- | -- | -1.83 | -- | -- | 0.357 | -- | 25.88 | 537 | -- | -- |
| 669.99 | 1.21 | 7.63 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 138.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 3 | 140.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 4 | 140.56 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 7 | 140.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 8 | 140.79 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 19 | 141.35 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 22 | 141.40 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 24 | 141.48 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 25 | 141.48 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 26 | 141.49 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 30 | 141.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 11 |
| 50 | 142.06 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 53 | 142.09 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 56 | 142.11 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 10 |
| 68 | 142.23 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 84 | 142.42 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 130 | 142.85 | wind | 3 | 14400 | < th | dose dependent | sin | 8 | NA |
| 144 | 143.01 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 145 | 143.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 147 | 143.02 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 148 | 143.02 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 15 |
| 149 | 143.03 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 181 | 143.20 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 202 | 143.35 | temperature | 25 | 720 | < th | dose dependent | sin | 3 | NA |
| 210 | 143.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 213 | 143.38 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 245 | 143.54 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 285 | 143.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 372 | 144.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 403 | 144.25 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 425 | 144.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 453 | 144.43 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 503 | 144.58 | wind | 3 | 14400 | < th | dose independent | sin | 7 | NA |
| 518 | 144.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 547 | 144.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 550 | 144.70 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 574 | 144.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 13 |
| 601 | 144.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 653 | 144.98 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 675 | 145.03 | wind | 3 | 14400 | > th | dose independent | sin | 7 | NA |
| 729 | 145.16 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 756 | 145.22 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 768 | 145.24 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 805 | 145.33 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 833 | 145.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 881 | 145.49 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 976 | 145.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 980 | 145.73 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 982 | 145.73 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |