Os10g0571100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0571100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.08 | 0.235 | 10.6 | -1.05 | 0.347 | 0.608 | -0.509 | -0.846 | -0.4 | 10.2 | 26.2 | 4643 | -- | -- |
| 25.62 | 0.236 | 10.6 | -0.846 | 0.364 | 0.567 | -0.435 | -- | -0.345 | 10.3 | 26.1 | 4639 | -- | -- |
| 26.09 | 0.238 | 10.6 | -1.06 | 0.348 | 0.605 | -- | -0.795 | -0.394 | 10.3 | 26.3 | 4681 | -- | -- |
| 26.51 | 0.24 | 10.6 | -0.837 | 0.358 | 0.556 | -- | -- | -0.328 | 10.4 | 26.3 | 4697 | -- | -- |
| 33.39 | 0.269 | 10.6 | -1.04 | -- | 0.582 | -- | -0.772 | -0.374 | -- | 26.43 | 4624 | -- | -- |
| 33.71 | 0.272 | 10.6 | -0.615 | 0.328 | -- | -0.516 | -- | -0.243 | 10.3 | -- | -- | -- | -- |
| 34.75 | 0.276 | 10.6 | -0.634 | 0.33 | -- | -- | -- | -0.243 | 10.6 | -- | -- | -- | -- |
| 33.75 | 0.271 | 10.6 | -0.839 | -- | 0.525 | -- | -- | -0.319 | -- | 26.4 | 4630 | -- | -- |
| 42.26 | 0.303 | 10.6 | -- | 0.355 | 0.295 | -- | -- | -0.18 | 10.5 | 28.5 | 4589 | -- | -- |
| 41.45 | 0.301 | 10.6 | -0.64 | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
| 45.35 | 0.315 | 10.6 | -- | 0.334 | -- | -- | -- | -0.173 | 10.7 | -- | -- | -- | -- |
| 48.51 | 0.325 | 10.6 | -- | -- | 0.205 | -- | -- | -0.203 | -- | 27.33 | 4551 | -- | -- |
| 52.27 | 0.337 | 10.6 | -- | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.72 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 2 | 23.83 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 3 | 23.96 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 12 | 24.33 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 16 | 24.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 17 | 24.40 | temperature | 30 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 18 | 24.41 | temperature | 10 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 20 | 24.44 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 25 | 24.45 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 34 | 24.46 | temperature | 10 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 56 | 24.50 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 70 | 24.51 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 86 | 24.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 179 | 24.58 | temperature | 10 | 14400 | > th | dose dependent | sin | 18 | NA |
| 181 | 24.58 | temperature | 10 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 194 | 24.58 | temperature | 10 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 203 | 24.59 | temperature | 30 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 300 | 24.63 | temperature | 30 | 14400 | < th | dose dependent | sin | 17 | NA |
| 389 | 24.65 | temperature | 30 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 438 | 24.66 | temperature | 10 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 501 | 24.68 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 528 | 24.68 | temperature | 30 | 14400 | < th | dose dependent | rect. | 15 | 19 |
| 603 | 24.69 | temperature | 10 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 815 | 24.74 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
| 933 | 24.76 | temperature | 15 | 4320 | > th | dose dependent | rect. | 8 | 6 |
| 979 | 24.76 | temperature | 30 | 14400 | < th | dose dependent | rect. | 19 | 23 |