BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0571100 Os10g0571100|AK070664
         (121 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G60150.1  | chr3:22222152-22223350 FORWARD LENGTH=171          142   3e-35
AT2G44525.1  | chr2:18382130-18383320 FORWARD LENGTH=171          137   1e-33

>AT3G60150.1 | chr3:22222152-22223350 FORWARD LENGTH=171
          Length = 170

 Score =  142 bits (359), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/112 (61%), Positives = 88/112 (78%), Gaps = 2/112 (1%)

Query: 7   QKAVAALPHLVKSLRSEPVSNAPRLRHLPSLRRTFSLYDQINLIDSVPEDQLRFQSYDDT 66
           QKA+A LP L++S+R+E V+  P L  LPSLRR FSLYDQINLID+VPEDQLRFQ +D+T
Sbjct: 5   QKAMATLPKLIQSMRNE-VTKQPSL-VLPSLRRAFSLYDQINLIDNVPEDQLRFQEFDET 62

Query: 67  GFNINKVKYEGSLLIVENKIMTWAPKSFAEITAESLSIFKVVHPIPGNSAIG 118
            F +N VKYEGSLL V N +M+W+P+ F++IT +SLSIF+ V PIP    +G
Sbjct: 63  SFTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRPIPELLIVG 114



>AT2G44525.1 | chr2:18382130-18383320 FORWARD LENGTH=171
          Length = 170

 Score =  137 bits (345), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 85/112 (75%), Gaps = 4/112 (3%)

Query: 8   KAVAALPHLVKSLRSE-PVSNAPRLRHLPSLRRTFSLYDQINLIDSVPEDQLRFQSYDDT 66
           K++A LP L++S+R E P  + P    LPSLRR FSLYDQINLID+VPEDQLRFQ ++DT
Sbjct: 6   KSMATLPKLIQSMRKEVPKHSNP---VLPSLRRAFSLYDQINLIDNVPEDQLRFQEFNDT 62

Query: 67  GFNINKVKYEGSLLIVENKIMTWAPKSFAEITAESLSIFKVVHPIPGNSAIG 118
            F +N VKYEGSLL V N +M+W+P+ F+EIT +SLSIF+ V PIP    +G
Sbjct: 63  SFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVG 114



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,459,201
Number of extensions: 92739
Number of successful extensions: 216
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 2
Length of query: 121
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 35
Effective length of database: 8,748,793
Effective search space: 306207755
Effective search space used: 306207755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 105 (45.1 bits)