Os10g0565300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0565300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.5 | 0.327 | 9.89 | -0.361 | 1.04 | -0.0624 | -0.217 | -1.26 | -0.0186 | 6.06 | 24.6 | 182 | -- | -- |
| 53.05 | 0.342 | 9.92 | -0.754 | 1.06 | -0.158 | -0.747 | -- | -0.118 | 5.78 | 27 | 265 | -- | -- |
| 48.6 | 0.325 | 9.89 | -0.353 | 1.04 | -0.0671 | -- | -1.28 | -0.0201 | 6.05 | 24.56 | 182 | -- | -- |
| 54.15 | 0.345 | 9.92 | -0.768 | 1.06 | -0.175 | -- | -- | -0.121 | 5.81 | 27.1 | 131 | -- | -- |
| 81.86 | 0.421 | 9.84 | -0.06 | -- | 0.62 | -- | -2.06 | 0.239 | -- | 26.22 | 431 | -- | -- |
| 54.6 | 0.346 | 9.91 | -0.708 | 0.984 | -- | -0.77 | -- | -0.0921 | 6.08 | -- | -- | -- | -- |
| 56.02 | 0.35 | 9.91 | -0.715 | 0.981 | -- | -- | -- | -0.0889 | 6.17 | -- | -- | -- | -- |
| 88.73 | 0.439 | 9.9 | -0.543 | -- | 0.541 | -- | -- | 0.0618 | -- | 26.6 | 425 | -- | -- |
| 69.09 | 0.389 | 9.9 | -- | 1 | -0.0791 | -- | -- | -0.0209 | 6.04 | 27.1 | 131 | -- | -- |
| 105.88 | 0.481 | 9.93 | -0.688 | -- | -- | -- | -- | -0.0672 | -- | -- | -- | -- | -- |
| 69.49 | 0.39 | 9.89 | -- | 0.97 | -- | -- | -- | -0.00931 | 6.21 | -- | -- | -- | -- |
| 96.41 | 0.457 | 9.88 | -- | -- | 0.617 | -- | -- | 0.136 | -- | 26.51 | 465 | -- | -- |
| 118.35 | 0.508 | 9.91 | -- | -- | -- | -- | -- | 0.00905 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 21 |
| 3 | 47.33 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 9 | 47.52 | temperature | 20 | 10 | > th | dose dependent | sin | 8 | NA |
| 23 | 47.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 28 | 47.68 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 29 | 47.69 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 37 | 47.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 49 | 47.82 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 74 | 47.91 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 12 |
| 88 | 47.97 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 98 | 47.99 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 14 |
| 99 | 47.99 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 109 | 48.04 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 117 | 48.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 11 |
| 131 | 48.11 | temperature | 25 | 4320 | > th | dose independent | sin | 11 | NA |
| 154 | 48.15 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 158 | 48.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 169 | 48.20 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 3 |
| 174 | 48.22 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 185 | 48.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 16 |
| 201 | 48.30 | temperature | 25 | 4320 | > th | dose dependent | sin | 12 | NA |
| 212 | 48.32 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 19 |
| 233 | 48.38 | temperature | 25 | 270 | < th | dose independent | rect. | 10 | 22 |
| 261 | 48.42 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 268 | 48.43 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 270 | 48.44 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 281 | 48.46 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 285 | 48.46 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 319 | 48.53 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 333 | 48.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 356 | 48.58 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 380 | 48.63 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 408 | 48.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 439 | 48.71 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 464 | 48.73 | temperature | 10 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 476 | 48.75 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 592 | 48.85 | temperature | 25 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 611 | 48.88 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 624 | 48.89 | temperature | 25 | 90 | > th | dose independent | sin | 10 | NA |
| 627 | 48.89 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 648 | 48.91 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 652 | 48.91 | temperature | 10 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 708 | 48.96 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 709 | 48.96 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 742 | 48.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 780 | 49.02 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 16 |
| 918 | 49.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 920 | 49.13 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 944 | 49.14 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 959 | 49.16 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 962 | 49.16 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 974 | 49.17 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 1 |