Os10g0553900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF863, plant family protein.
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Os10g0553900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF863, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.54 | 0.255 | 9.78 | -0.0825 | 1.24 | -1.14 | -1.2 | 2.65 | -0.1 | 6.24 | 50.06 | 277 | -- | -- |
| 30.46 | 0.257 | 9.77 | -0.0198 | 1.23 | -0.567 | -1.15 | -- | -0.101 | 6.22 | 52 | 288 | -- | -- |
| 32.93 | 0.267 | 9.78 | -0.0691 | 1.25 | -1.22 | -- | 2.42 | -0.0817 | 6.29 | 50 | 289 | -- | -- |
| 33.37 | 0.269 | 9.76 | 0.00267 | 1.25 | -0.464 | -- | -- | -0.0729 | 6.3 | 53 | 403 | -- | -- |
| 103.95 | 0.475 | 9.8 | 0.0678 | -- | -0.28 | -- | 1.38 | -0.0969 | -- | 41.71 | 412 | -- | -- |
| 32.83 | 0.269 | 9.78 | 0.033 | 1.14 | -- | -1.4 | -- | -0.125 | 6.22 | -- | -- | -- | -- |
| 37.59 | 0.287 | 9.77 | 0.0185 | 1.13 | -- | -- | -- | -0.12 | 6.32 | -- | -- | -- | -- |
| 66.07 | 0.379 | 9.82 | -0.0326 | -- | 0.779 | -- | -- | -0.101 | -- | 83 | 427 | -- | -- |
| 33.34 | 0.269 | 9.76 | -- | 1.26 | -0.479 | -- | -- | -0.0787 | 6.29 | 56 | 432 | -- | -- |
| 104.35 | 0.477 | 9.79 | 0.0486 | -- | -- | -- | -- | -0.0951 | -- | -- | -- | -- | -- |
| 37.6 | 0.287 | 9.77 | -- | 1.13 | -- | -- | -- | -0.122 | 6.32 | -- | -- | -- | -- |
| 65.26 | 0.376 | 9.79 | -- | -- | 0.82 | -- | -- | -0.0788 | -- | 82.61 | 481 | -- | -- |
| 104.41 | 0.477 | 9.8 | -- | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.54 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 2 | 23.54 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 5 | 23.66 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 23.70 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 7 | 23.74 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 8 | 23.88 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 12 | 24.12 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 13 | 24.15 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 14 | 24.19 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 9 |
| 17 | 24.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 18 | 24.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 24 | 24.38 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 27 | 24.43 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 30 | 24.47 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 31 | 24.48 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 33 | 24.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 34 | 24.53 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 35 | 24.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 36 | 24.54 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 40 | 24.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 44 | 24.57 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 56 | 24.65 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 57 | 24.65 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 58 | 24.66 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 77 | 24.76 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 81 | 24.77 | radiation | 10.0 | 270 | < th | dose independent | rect. | 17 | 9 |
| 85 | 24.78 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 103 | 24.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 119 | 24.91 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 121 | 24.91 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 122 | 24.91 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 125 | 24.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 4 |
| 126 | 24.91 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 128 | 24.91 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 134 | 24.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 144 | 24.95 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 145 | 24.95 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 147 | 24.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 149 | 24.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 151 | 24.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 152 | 24.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 154 | 24.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 155 | 24.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 159 | 24.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 187 | 25.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 188 | 25.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 244 | 25.12 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 251 | 25.14 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 255 | 25.14 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 256 | 25.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 8 |
| 258 | 25.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 262 | 25.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 263 | 25.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 265 | 25.16 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 268 | 25.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 274 | 25.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 275 | 25.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 277 | 25.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 278 | 25.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 289 | 25.21 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 291 | 25.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 315 | 25.28 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 333 | 25.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 16 |
| 336 | 25.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 350 | 25.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 16 |
| 358 | 25.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 359 | 25.37 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 375 | 25.42 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 376 | 25.43 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 380 | 25.45 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 410 | 25.53 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 440 | 25.60 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 465 | 25.65 | temperature | 15.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 468 | 25.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 471 | 25.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 472 | 25.66 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 6 |
| 473 | 25.66 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 476 | 25.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 18 |
| 502 | 25.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 546 | 25.77 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 578 | 25.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 7 |
| 598 | 25.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 619 | 25.88 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 624 | 25.89 | radiation | 20.0 | 30 | < th | dose independent | rect. | 3 | 17 |
| 637 | 25.91 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 643 | 25.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 7 |
| 647 | 25.93 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 656 | 25.95 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 693 | 26.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 697 | 26.01 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 703 | 26.01 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 710 | 26.01 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 716 | 26.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 736 | 26.01 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 740 | 26.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 17 |
| 757 | 26.01 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 787 | 26.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 799 | 26.06 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 825 | 26.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 826 | 26.09 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 827 | 26.09 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 828 | 26.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 15 |
| 829 | 26.09 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 837 | 26.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 857 | 26.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 866 | 26.12 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 874 | 26.13 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 876 | 26.13 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 898 | 26.14 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 899 | 26.14 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 902 | 26.14 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 926 | 26.15 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 14 |
| 927 | 26.16 | temperature | 15.0 | 10 | > th | dose independent | rect. | 20 | 7 |
| 941 | 26.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 944 | 26.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 968 | 26.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 9 |
| 980 | 26.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 9 |