Os10g0546200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0546200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.54 | 0.213 | 8.55 | -0.252 | 0.14 | -0.394 | -0.0512 | -0.909 | 0.142 | 18.7 | 84.99 | 6608 | -- | -- |
| 21.58 | 0.216 | 8.55 | -0.205 | 0.153 | -0.414 | -0.118 | -- | 0.149 | 18.4 | 84 | 6422 | -- | -- |
| 20.54 | 0.211 | 8.55 | -0.253 | 0.138 | -0.394 | -- | -0.912 | 0.142 | 18.7 | 85 | 6638 | -- | -- |
| 21.61 | 0.217 | 8.55 | -0.208 | 0.156 | -0.416 | -- | -- | 0.151 | 18.2 | 84 | 6415 | -- | -- |
| 21.24 | 0.215 | 8.54 | -0.265 | -- | -0.374 | -- | -0.908 | 0.136 | -- | 84.15 | 7013 | -- | -- |
| 23.83 | 0.229 | 8.56 | -0.181 | 0.119 | -- | -0.0598 | -- | 0.0939 | 17.9 | -- | -- | -- | -- |
| 23.84 | 0.229 | 8.56 | -0.181 | 0.119 | -- | -- | -- | 0.0937 | 17.8 | -- | -- | -- | -- |
| 21.75 | 0.217 | 8.55 | -0.183 | -- | -0.393 | -- | -- | 0.125 | -- | 138.3 | 2761 | -- | -- |
| 22.56 | 0.221 | 8.55 | -- | 0.133 | -0.413 | -- | -- | 0.147 | 18.7 | 81 | 5414 | -- | -- |
| 24.57 | 0.232 | 8.56 | -0.185 | -- | -- | -- | -- | 0.0909 | -- | -- | -- | -- | -- |
| 24.7 | 0.232 | 8.56 | -- | 0.122 | -- | -- | -- | 0.114 | 17.8 | -- | -- | -- | -- |
| 22.64 | 0.222 | 8.55 | -- | -- | -0.394 | -- | -- | 0.146 | -- | 172.6 | 2758 | -- | -- |
| 25.47 | 0.236 | 8.56 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 2 | 19.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 3 | 19.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 4 | 19.27 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 9 | 19.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 18 | 19.35 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 19 | 19.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 35 | 19.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 9 |
| 38 | 19.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 39 | 19.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 40 | 19.40 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 44 | 19.40 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 45 | 19.40 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 82 | 19.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 86 | 19.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 87 | 19.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 114 | 19.56 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 115 | 19.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 131 | 19.61 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 179 | 19.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 20 |
| 180 | 19.73 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 20 |
| 185 | 19.73 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 20 |
| 197 | 19.75 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 207 | 19.76 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 213 | 19.76 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 234 | 19.79 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 235 | 19.79 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 241 | 19.80 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 242 | 19.80 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 244 | 19.80 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 245 | 19.81 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 253 | 19.83 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 280 | 19.86 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 297 | 19.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 323 | 19.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 328 | 19.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 345 | 19.91 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 3 | NA |
| 349 | 19.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 10 | 7 |
| 382 | 19.94 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 413 | 19.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 416 | 19.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 431 | 20.00 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 439 | 20.01 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 442 | 20.01 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 2 | 11 |
| 446 | 20.02 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 502 | 20.07 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 508 | 20.07 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 516 | 20.08 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 530 | 20.12 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 537 | 20.12 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 554 | 20.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 560 | 20.15 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 595 | 20.18 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 602 | 20.19 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 617 | 20.20 | wind | 3.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 656 | 20.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 21 |
| 690 | 20.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 693 | 20.24 | wind | 3.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 739 | 20.28 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 758 | 20.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 770 | 20.30 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 7 |
| 773 | 20.30 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 797 | 20.32 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 813 | 20.33 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 852 | 20.35 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 861 | 20.35 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 871 | 20.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 881 | 20.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 13 |
| 902 | 20.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 13 |
| 915 | 20.37 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 917 | 20.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 921 | 20.37 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 930 | 20.38 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 935 | 20.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 942 | 20.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 975 | 20.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |