BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0546200 Os10g0546200|Os10g0546200
(948 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G04480.1 | chr5:1271886-1277793 REVERSE LENGTH=1051 699 0.0
AT4G01210.1 | chr4:507738-512362 REVERSE LENGTH=1032 462 e-130
>AT5G04480.1 | chr5:1271886-1277793 REVERSE LENGTH=1051
Length = 1050
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/902 (42%), Positives = 529/902 (58%), Gaps = 98/902 (10%)
Query: 130 GLAPVRLALFVGTMNINAQSLMVATLAKSLKNLGYEVEI--------------------- 168
G+ P RLAL +G M + ++LM+ T+ K+L+ LGY ++
Sbjct: 162 GVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKVFAVENGEARSLWEQLAGHVKV 221
Query: 169 ---------------QCCASKLSGRE--NGRFNEPFQFLPVVWLIHEDALGQFLRNPELH 211
A L +E + EPF+ +P++W++HED L R P
Sbjct: 222 LVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSVPLIWIVHEDILAN--RLPVYQ 279
Query: 212 QSIPNH-IEDWRTHFNACTYVVFPDSYLPLLHSALDTGNFLVISGSPVDILATKRYSSSH 270
+ N I WR+ F VVFP LP+LHS LD GNF+VI S VD+ A + YS +H
Sbjct: 280 RMGQNSLISHWRSAFARADVVVFPQFTLPMLHSVLDDGNFVVIPESVVDVWAAESYSETH 339
Query: 271 TQESAR--NQYGSKEDDVVVLVVGSYLFFDELPWDFATVLRASAPHIMDMAKTKNLG--V 326
T+++ R N++G EDDV++LV+GS F+DE WD A + P + + K+
Sbjct: 340 TKQNLREINEFG--EDDVIILVLGSSFFYDEFSWDNAVAMHMLGPLLTRYGRRKDTSGSF 397
Query: 327 QFIFFCGNDTDAYNSAFQELASHMGFPLGSVKHFSLTHDIRNLLVFADIVLYGSSRQEPV 386
+F+F GN T + A QE+AS +G G+V+HF L D+ +L ADI++Y SS++E
Sbjct: 398 KFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFGLNEDVNRVLRMADILVYASSQEEQN 457
Query: 387 FPPLLLRSMASEIPIIVPNLTVITKYITDGTHGFLFNADDPSTMVSAFAQILGEKRLSAR 446
FPPL++R+M+ IPII P+ ++ KY+ D HG F +DP ++ AF+ ++ + RLS
Sbjct: 458 FPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIFFRRNDPDALLKAFSPLISDGRLSKF 517
Query: 447 AFSVALEGKLLSKNMLAYDCITAHVMLLESVLHYPSYAKLPSPVSKLQERTWLWDLFETK 506
A ++A G+LL+KN++A +CIT + LLE++LH+PS LP +S+LQ W W+ F ++
Sbjct: 518 AQTIASSGRLLTKNLMATECITGYARLLENMLHFPSDTFLPGSISQLQVAAWEWNFFRSE 577
Query: 507 AALENSSSDDDSQLL---TRIIDNLVDESHESNQTYSDSNDTSLY---NYPSLSDWNDLN 560
S D + + I+ + ++ ++ + ++ +L+ PS DW+ L
Sbjct: 578 LEQPKSFILDSAYAFIGKSGIVFQVEEKFMGVIESTNPVDNNTLFVSDELPSKLDWDVLE 637
Query: 561 XXXXXXXXXXXXXXXASFSPLPFPIDERVERPLLSWDEVYKNARKSERLKPEGNERDEGE 620
+++R+ER + W+E+Y+NARKSE+LK E NERDEGE
Sbjct: 638 EIEGAEEYEKVESEE---------LEDRMERDVEDWEEIYRNARKSEKLKFEVNERDEGE 688
Query: 621 LERTGQP---------------------------SKGGRRPRSDDVDAVTHLSVLDNPYY 653
LERTG+P S RR SDDVDA L +L++ YY
Sbjct: 689 LERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDAADRLPLLNDTYY 748
Query: 654 SDRLCEFGAMFAVANRIDAVHKLPWIGFQSWQAAGRKVSLSEKAEETLEETMAGENNEDV 713
D LCE G MF+VAN++D++H PWIGFQSW+AAGRKVSLS KAEE+LE + E ++
Sbjct: 749 RDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESLENIIKQETKGEI 808
Query: 714 IYYWAPMDMDQTS-------NFWSMCDWLNAGRCRTLFEDAFRTMYGLSDGITALPPMPN 766
IY+W +D+D + FWSMCD LN G CRT FEDAFR MYGL + I ALPPMP
Sbjct: 809 IYFWTRLDIDGDAYGSKNALTFWSMCDILNQGNCRTTFEDAFRHMYGLPEHIEALPPMPE 868
Query: 767 DGDYWSTLHSWVMPTPSFLKFIMFSRMFVDYLHSLNVNGTDPASCLLGASQLEKRHCYCR 826
DG +WS+LH+WVMPTPSFL+F+MFSRMF + L +L+ N D SC L +S LE++HCYCR
Sbjct: 869 DGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNLNDSKSCSLASSLLERKHCYCR 928
Query: 827 ILEVLVNVWAYHSGKKMAYLNPVTGDIREQHPLDDRNE-MWVKFFNFTLLKSMDEDLAEE 885
+LE+LVNVWAYHSG+KM Y+NP G + EQHPL R MW K+FNFTLLKSMDEDLAE
Sbjct: 929 VLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLQQRKGLMWAKYFNFTLLKSMDEDLAEA 988
Query: 886 ADDGMHAGDDQWLWPLTGQVFWPGIADREREEXXXXXXXXXXXXXXXXXERQKSGYKQKP 945
ADD H ++WLWPLTG+V W G+ +REREE +R K+GYKQK
Sbjct: 989 ADDKDHP-RERWLWPLTGEVHWKGVYEREREERYRLKMDKKRKTKEKLYDRIKNGYKQKS 1047
Query: 946 LG 947
LG
Sbjct: 1048 LG 1049
>AT4G01210.1 | chr4:507738-512362 REVERSE LENGTH=1032
Length = 1031
Score = 462 bits (1188), Expect = e-130, Method: Compositional matrix adjust.
Identities = 279/861 (32%), Positives = 449/861 (52%), Gaps = 115/861 (13%)
Query: 130 GLAPVRLALFVGTMNINAQSLMVATLAKSLKNLGYEVEI--------------------- 168
G +LAL G + + + +++ +L+K+L+ +GY +E+
Sbjct: 143 GFRKPKLALVFGDLLADPEQVLMVSLSKALQEVGYAIEVYSLEDGPVNSIWQKMGVPVTI 202
Query: 169 -------QCCASKLSG--------RENGRF----NEPFQFLPVVWLIHEDALGQFLRNPE 209
C LS R F EPF+ LP++W+I+E+ L +R+ +
Sbjct: 203 LKPNQESSCVIDWLSYDGIIVNSLRARSMFTCFMQEPFKSLPLIWVINEETLA--VRSRQ 260
Query: 210 LHQSIPNHI-EDWRTHFNACTYVVFPDSYLPLLHSALDTGNFLVISGSPVDILATKRYSS 268
+ + + DW+ F+ + VVF + LP+L++ D GNF VI GSP ++ K
Sbjct: 261 YNSTGQTELLTDWKKIFSRASVVVFHNYLLPILYTEFDAGNFYVIPGSPEEVCKAKNL-- 318
Query: 269 SHTQESARNQYGSKEDDVVVLVVGSYLFFDELPWDFATVLRASAPHIM-DMAKTKNLGVQ 327
++ ++DDVV+ +VGS + + A +L+A P + ++ N ++
Sbjct: 319 ---------EFPPQKDDVVISIVGSQFLYKGQWLEHALLLQALRPLFSGNYLESDNSHLK 369
Query: 328 FIFFCGNDTDAYNSAFQELASHMGFPLGSVKHFSLTHDIRNLLVFADIVLYGSSRQEPVF 387
I G Y+ A + ++ ++ +P +VKH + ++ +L +D+V+YGS +E F
Sbjct: 370 IIVLGGETASNYSVAIETISQNLTYPKEAVKHVRVAGNVDKILESSDLVIYGSFLEEQSF 429
Query: 388 PPLLLRSMASEIPIIVPNLTVITKYITDGTHGFLFNADDPSTMVSAFAQILGEKRLSARA 447
P +L+++M+ PI+ P+L I KY+ D G+LF + + +++ E ++S A
Sbjct: 430 PEILMKAMSLGKPIVAPDLFNIRKYVDDRVTGYLFPKQNLKVLSQVVLEVITEGKISPLA 489
Query: 448 FSVALEGKLLSKNMLAYDCITAHVMLLESVLHYPSYAKLPSPVSKLQ---ERTWLWDLFE 504
+A+ GK KNM+A + I + LLE++L + S P V K+ W W FE
Sbjct: 490 QKIAMMGKTTVKNMMARETIEGYAALLENMLKFSSEVASPKDVQKVPPELREEWSWHPFE 549
Query: 505 TKAALENSSSDDDS---QLLTRIIDNLVDESHESNQTYSDSNDTSLYNYPSLSDWNDLNX 561
A ++ S ++ + + L ++ + E+ + + ++D+ +Y W +
Sbjct: 550 --AFMDTSPNNRIARSYEFLAKVEGHWNYTPGEAMKFGAVNDDSFVYEI-----WEEERY 602
Query: 562 XXXXXXXXXXXXXXASFSPLPFPIDERVERPLLSWDEVYKNARKSERLKPEGNERDEGEL 621
+ RV + +W++VYK+A++++R K + +ERDEGEL
Sbjct: 603 LQMMNSKKRREDEE---------LKSRVLQYRGTWEDVYKSAKRADRSKNDLHERDEGEL 653
Query: 622 ERTGQP---------------------------SKGGRRPRSDDVDAVTHLSVLDNPYYS 654
RTGQP S GRRPR DDVDA + L + +NPYY
Sbjct: 654 LRTGQPLCIYEPYFGEGTWSFLHQDPLYRGVGLSVKGRRPRMDDVDASSRLPLFNNPYYR 713
Query: 655 DRLCEFGAMFAVANRIDAVHKLPWIGFQSWQAAGRKVSLSEKAEETLEETMAGENNEDVI 714
D L +FGA FA++N+ID +HK WIGFQSW+A RK SLS+ AE+ L + + D +
Sbjct: 714 DALGDFGAFFAISNKIDRLHKNSWIGFQSWRATARKESLSKIAEDALLNAIQTRKHGDAL 773
Query: 715 YYWAPMDMDQTS----NFWSMCDWLNAGRCRTLFEDAFRTMYGLSDGITALPPMPNDGDY 770
Y+W MD D + FWS CD +NAG CR + + + MY + + + +LPPMP DGD
Sbjct: 774 YFWVRMDKDPRNPLQKPFWSFCDAINAGNCRFAYNETLKKMYSIKN-LDSLPPMPEDGDT 832
Query: 771 WSTLHSWVMPTPSFLKFIMFSRMFVDYLHS-LNVNGTDPASCLLGASQLEKRHCYCRILE 829
WS + SW +PT SFL+F+MFSRMFVD L + + C L ++ +HCY R+LE
Sbjct: 833 WSVMQSWALPTRSFLEFVMFSRMFVDSLDAQIYEEHHRTNRCYLSLTK--DKHCYSRVLE 890
Query: 830 VLVNVWAYHSGKKMAYLNPVTGDIREQHPLDD-RNEMWVKFFNFTLLKSMDEDLAEEADD 888
+LVNVWAYHS +++ Y++P TG ++EQH + R +MWVK+F++T LK+MDEDLAEEAD
Sbjct: 891 LLVNVWAYHSARRIVYIDPETGLMQEQHKQKNRRGKMWVKWFDYTTLKTMDEDLAEEADS 950
Query: 889 GMHAGDDQWLWPLTGQVFWPG 909
G WLWP TG++ W G
Sbjct: 951 DRRVG--HWLWPWTGEIVWRG 969
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,024,488
Number of extensions: 861962
Number of successful extensions: 1935
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1918
Number of HSP's successfully gapped: 4
Length of query: 948
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 840
Effective length of database: 8,145,641
Effective search space: 6842338440
Effective search space used: 6842338440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)