Os10g0540900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0540900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 126.95 | 0.529 | 7.41 | -1.83 | 0.428 | 1.87 | -0.644 | 0.1 | -0.914 | 6.15 | 15.6 | 357 | -- | -- |
| 126.95 | 0.525 | 7.41 | -1.84 | 0.428 | 1.85 | -0.663 | -- | -0.915 | 6.12 | 15.78 | 356 | -- | -- |
| 127.74 | 0.526 | 7.4 | -1.75 | 0.434 | 1.9 | -- | 0.642 | -0.892 | 6.35 | 15.4 | 365 | -- | -- |
| 128.01 | 0.527 | 7.41 | -1.85 | 0.435 | 1.87 | -- | -- | -0.92 | 6.35 | 15.9 | 365 | -- | -- |
| 134.99 | 0.541 | 7.37 | -1.63 | -- | 1.56 | -- | 0.852 | -0.809 | -- | 14.7 | 347 | -- | -- |
| 168.77 | 0.609 | 7.36 | -1.43 | 0.154 | -- | 1.06 | -- | -0.636 | 17.1 | -- | -- | -- | -- |
| 171.27 | 0.613 | 7.35 | -1.42 | 0.174 | -- | -- | -- | -0.63 | 15.3 | -- | -- | -- | -- |
| 135.08 | 0.541 | 7.4 | -1.76 | -- | 1.53 | -- | -- | -0.852 | -- | 15.28 | 334 | -- | -- |
| 207.77 | 0.671 | 7.35 | -- | 0.257 | 1.02 | -- | -- | -0.618 | 6.13 | 21.8 | 261 | -- | -- |
| 172.99 | 0.615 | 7.35 | -1.43 | -- | -- | -- | -- | -0.635 | -- | -- | -- | -- | -- |
| 224.75 | 0.701 | 7.32 | -- | 0.202 | -- | -- | -- | -0.471 | 15.3 | -- | -- | -- | -- |
| 209.03 | 0.673 | 7.34 | -- | -- | 0.832 | -- | -- | -0.591 | -- | 20.09 | 248 | -- | -- |
| 227.06 | 0.703 | 7.32 | -- | -- | -- | -- | -- | -0.476 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.42 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 2 | 118.44 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 3 | 118.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 5 | 118.96 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 12 | 119.53 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 14 | 119.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 17 | 119.79 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 22 | 119.99 | temperature | 10.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 78 | 121.89 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 94 | 122.27 | temperature | 30.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 119 | 122.71 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 143 | 123.10 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 145 | 123.11 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 151 | 123.18 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 154 | 123.27 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 16 |
| 185 | 123.85 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 284 | 125.03 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 314 | 125.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 319 | 125.53 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 350 | 125.84 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 378 | 126.12 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 386 | 126.19 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 387 | 126.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 397 | 126.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 413 | 126.43 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 422 | 126.49 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 427 | 126.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 447 | 126.69 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 450 | 126.74 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 458 | 126.77 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 464 | 126.86 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 484 | 127.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 514 | 127.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 533 | 127.37 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 543 | 127.42 | temperature | 15.0 | 270 | > th | dose dependent | no | NA | NA |
| 561 | 127.60 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 569 | 127.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 588 | 127.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 591 | 127.81 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 610 | 127.92 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 613 | 127.94 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 625 | 128.02 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 637 | 128.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 667 | 128.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 668 | 128.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 688 | 128.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 703 | 128.47 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 736 | 128.68 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 741 | 128.72 | temperature | 30.0 | 270 | < th | dose dependent | no | NA | NA |
| 758 | 128.80 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 763 | 128.83 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 839 | 129.23 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 903 | 129.54 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 923 | 129.62 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 11 |
| 949 | 129.74 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 989 | 129.88 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 992 | 129.89 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |