Os10g0540300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0540300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.89 | 0.22 | 11.8 | 0.272 | 0.0125 | 1.38 | -0.456 | 0.539 | -0.05 | 4.46 | 9.886 | 1351 | -- | -- |
| 22.13 | 0.219 | 11.8 | 0.156 | 0.00896 | 1.39 | -0.416 | -- | -0.081 | 4.6 | 14.08 | 1337 | -- | -- |
| 22.3 | 0.22 | 11.8 | 0.308 | 0.0807 | 1.36 | -- | 0.619 | -0.0371 | 1.96 | 10.95 | 1538 | -- | -- |
| 22.51 | 0.221 | 11.8 | 0.15 | 0.0835 | 1.37 | -- | -- | -0.0815 | 1.7 | 10.23 | 1504 | -- | -- |
| 22.45 | 0.221 | 11.8 | 0.254 | -- | 1.38 | -- | 0.431 | -0.0539 | -- | 11.89 | 1350 | -- | -- |
| 54.53 | 0.346 | 11.8 | 0.584 | 0.127 | -- | -0.263 | -- | 0.171 | 2.87 | -- | -- | -- | -- |
| 54.72 | 0.346 | 11.8 | 0.59 | 0.127 | -- | -- | -- | 0.173 | 2.02 | -- | -- | -- | -- |
| 22.6 | 0.221 | 11.8 | 0.159 | -- | 1.39 | -- | -- | -0.0783 | -- | 11.44 | 1333 | -- | -- |
| 23.02 | 0.223 | 11.8 | -- | 0.0958 | 1.44 | -- | -- | -0.108 | 2.02 | 10.81 | 1539 | -- | -- |
| 55.69 | 0.349 | 11.8 | 0.595 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 63.89 | 0.374 | 11.8 | -- | 0.138 | -- | -- | -- | 0.107 | 2.12 | -- | -- | -- | -- |
| 23.17 | 0.224 | 11.8 | -- | -- | 1.45 | -- | -- | -0.106 | -- | 11.36 | 1344 | -- | -- |
| 65.03 | 0.376 | 11.8 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.10 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 29 | 21.33 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 32 | 21.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 64 | 21.42 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 244 | 21.91 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 245 | 21.92 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 271 | 21.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 272 | 21.97 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 297 | 21.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 308 | 22.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 311 | 22.01 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 319 | 22.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 324 | 22.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 22 | 23 |
| 335 | 22.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 529 | 22.26 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 540 | 22.27 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 555 | 22.29 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 6 |
| 641 | 22.38 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 706 | 22.44 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 749 | 22.48 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 855 | 22.58 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 959 | 22.68 | temperature | 10 | 4320 | > th | dose dependent | rect. | 1 | 4 |