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Os10g0536500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0371) R2 : 0.867
β1 : -1.88 (0.134) R2dD : 0.0592 R2D : -0.00344
β2 : 7.03 (0.191) R2dC : 1.89 R2C : 0.455
β3 : 2.8 (0.181) R2dE : 0.335 R2E : -1.12
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.827 (0.0785) R2dN8 : 0.0447 R2N8 : -0.000941
σ : 0.685
deviance : 216.17
__
_____
C
peak time of C : 22.8
E
wheather : atmosphere
threshold : 1159
memory length : 296
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 0.0166
open length of G : 17

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.09 0.651 13.2 -1.7 6.94 2.72 3.46 1.17 -0.806 22.8 1037 290 24 17.1
193.59 0.648 13.2 -1.75 7.02 2.76 2.57 -- -0.829 22.8 1141 287 0.0167 17.1
201.53 0.661 13.2 -1.92 7.06 3.09 -- -1.98 -0.833 22.8 1096 324 23.5 17.6
216.17 0.685 13.2 -1.88 7.03 2.8 -- -- -0.827 22.8 1159 296 0.0166 17
1071.19 1.53 13 -1.66 -- -2.26 -- -1.02 -0.608 -- 1114 2851 0.383 18.5
304.54 0.818 13.1 -1.67 4.41 -- 2.39 -- -0.707 22.8 -- -- -- --
328.48 0.849 13.1 -1.77 4.4 -- -- -- -0.714 22.8 -- -- -- --
235.26 0.714 13.1 -2.37 -- 3.98 -- -- -0.787 -- 1326 552 9 18.5
309.5 0.819 13.2 -- 7.08 2.83 -- -- -0.678 22.8 1166 293 0.0833 16.9
1525.39 1.82 13 -1.68 -- -- -- -- -0.687 -- -- -- -- --
410.74 0.948 13.1 -- 4.38 -- -- -- -0.518 22.8 -- -- -- --
318.38 0.831 13 -- -- 3.91 -- -- -0.568 -- 1340 546 8.73 18.8
1599.55 1.87 13 -- -- -- -- -- -0.501 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 193.64 radiation 40.0 270 < th dose dependent rect. 17 7
3 193.84 atmosphere 1015.0 270 < th dose independent rect. 24 17
4 193.85 temperature 10.0 270 > th dose independent rect. 17 7
5 193.85 humidity 50.0 270 > th dose independent rect. 17 7
6 193.85 radiation 20.0 270 < th dose independent rect. 17 7
9 193.85 temperature 10.0 270 > th dose independent rect. 24 17
11 194.06 wind 9.0 270 < th dose independent rect. 17 7
12 194.48 wind 9.0 270 < th dose independent rect. 24 17
13 194.50 precipitation 0.1 270 < th dose independent rect. 24 17
14 194.50 precipitation 0.1 270 < th dose dependent rect. 24 17
17 196.05 precipitation 0.1 270 < th dose independent rect. 17 7
18 196.05 precipitation 0.1 270 < th dose dependent rect. 17 7
19 196.93 temperature 30.0 270 < th dose independent rect. 19 16
20 197.48 atmosphere 995.0 270 > th dose independent rect. 24 17
21 197.59 atmosphere 995.0 270 > th dose independent rect. 17 7
23 198.22 temperature 15.0 270 > th dose independent rect. 4 9
28 198.90 precipitation 0.1 270 < th dose independent rect. 4 9
29 198.90 precipitation 0.1 270 < th dose dependent rect. 4 9
41 199.10 atmosphere 995.0 270 > th dose independent rect. 4 9
42 199.10 atmosphere 1015.0 270 < th dose independent rect. 4 9
43 199.10 temperature 10.0 270 > th dose independent rect. 13 15
52 199.71 wind 9.0 270 < th dose independent rect. 13 15
53 199.86 wind 9.0 270 < th dose independent rect. 4 9
74 201.60 wind 1.0 270 > th dose independent rect. 11 8
77 201.76 temperature 20.0 10 > th dose independent rect. 6 9
79 201.95 wind 1.0 270 > th dose independent rect. 17 7
87 203.43 temperature 30.0 270 < th dose independent rect. 18 6
115 204.22 precipitation 0.1 270 < th dose independent rect. 13 16
116 204.22 precipitation 0.1 270 < th dose dependent rect. 13 16
133 205.15 wind 1.0 270 > th dose independent rect. 13 15
137 205.37 temperature 10.0 270 > th dose independent rect. 11 8
138 205.37 atmosphere 1015.0 270 < th dose independent rect. 11 8
139 205.37 temperature 10.0 270 > th dose independent rect. 19 16
140 205.37 atmosphere 995.0 270 > th dose independent rect. 19 16
143 205.59 wind 9.0 270 < th dose independent rect. 19 16
149 205.99 wind 9.0 270 < th dose independent rect. 11 8
150 205.99 precipitation 0.1 10 < th dose independent rect. 6 9
151 205.99 precipitation 0.1 10 < th dose dependent rect. 6 9
152 206.04 temperature 10.0 10 > th dose independent rect. 6 9
154 206.04 atmosphere 995.0 10 > th dose independent rect. 6 9
155 206.04 atmosphere 1015.0 10 < th dose independent rect. 6 9
156 206.04 temperature 10.0 10 > th dose independent rect. 15 15
157 206.04 radiation 40.0 10 < th dose independent rect. 15 15
159 206.13 humidity 50.0 270 > th dose independent rect. 19 16
166 206.40 temperature 30.0 270 < th dose independent rect. 5 8
170 206.51 precipitation 0.1 270 < th dose independent rect. 11 8
171 206.51 precipitation 0.1 270 < th dose dependent rect. 11 8
177 206.68 temperature 30.0 270 < th dose independent rect. 19 4
209 207.11 wind 9.0 10 < th dose independent rect. 15 15
218 207.47 temperature 15.0 270 > th dose independent rect. 23 7
224 207.61 precipitation 0.1 270 < th dose independent rect. 23 7
225 207.61 precipitation 0.1 270 < th dose dependent rect. 23 7
226 207.65 radiation 1.0 270 < th dose dependent rect. 6 18
230 207.76 wind 1.0 270 > th dose independent rect. 13 4
231 207.77 wind 9.0 10 < th dose independent rect. 6 9
232 207.84 temperature 10.0 1440 > th dose independent rect. 7 9
235 207.84 temperature 10.0 1440 > th dose independent rect. 16 15
243 208.08 wind 9.0 270 < th dose independent rect. 23 7
245 208.08 temperature 30.0 270 < th dose independent rect. 23 7
246 208.08 humidity 50.0 270 > th dose independent rect. 23 7
249 208.08 atmosphere 995.0 270 > th dose independent rect. 23 7
250 208.08 radiation 20.0 270 < th dose independent rect. 23 7
254 208.08 temperature 10.0 270 > th dose independent rect. 6 17
260 208.35 radiation 1.0 270 < th dose independent rect. 7 17
261 208.37 atmosphere 1015.0 270 < th dose independent rect. 23 7
266 208.56 precipitation 0.1 270 < th dose independent rect. 19 16
268 208.56 precipitation 0.1 270 < th dose dependent rect. 19 16
269 208.68 humidity 50.0 270 > th dose independent rect. 4 9
270 208.68 radiation 40.0 270 < th dose dependent rect. 23 7
273 208.84 radiation 1.0 10 > th dose independent rect. 6 9
283 209.23 wind 9.0 270 < th dose independent rect. 6 17
288 209.33 radiation 40.0 10 < th dose dependent rect. 14 16
318 209.87 atmosphere 995.0 270 > th dose independent rect. 13 16
344 210.41 temperature 20.0 270 > th dose independent rect. 12 6
345 210.46 wind 9.0 270 < th dose independent rect. 18 18
346 210.48 wind 9.0 270 < th dose dependent rect. 17 7
352 210.59 wind 9.0 270 < th dose independent rect. 12 6
355 210.67 precipitation 0.1 270 < th dose independent rect. 6 17
356 210.67 precipitation 0.1 270 < th dose dependent rect. 6 17
365 210.76 temperature 20.0 270 > th dose independent rect. 13 4
392 211.31 temperature 10.0 270 > th dose independent rect. 13 4
394 211.31 atmosphere 1010.0 270 < th dose independent rect. 13 4
396 211.31 temperature 10.0 270 > th dose independent rect. 17 20
398 211.36 precipitation 0.1 270 < th dose independent rect. 12 6
399 211.36 wind 1.0 270 > th dose independent rect. 4 9
400 211.36 precipitation 0.1 270 < th dose dependent rect. 12 6
401 211.39 precipitation 0.1 30 < th dose independent rect. 15 15
404 211.39 precipitation 0.1 30 < th dose dependent rect. 15 15
405 211.40 wind 9.0 270 < th dose independent rect. 13 4
407 211.40 humidity 50.0 10 > th dose dependent rect. 19 7
409 211.48 wind 9.0 270 < th dose independent rect. 17 20
439 211.94 precipitation 0.1 270 < th dose independent rect. 13 4
441 211.94 precipitation 0.1 270 < th dose dependent rect. 13 4
450 212.05 temperature 10.0 10 > th dose dependent rect. 15 15
471 212.16 wind 9.0 270 < th dose dependent rect. 18 5
475 212.21 humidity 50.0 270 > th dose dependent rect. 18 6
518 212.63 temperature 10.0 270 > th dose dependent rect. 12 6
521 212.67 precipitation 0.1 270 < th dose independent rect. 18 18
523 212.67 precipitation 0.1 270 < th dose dependent rect. 18 18
536 212.87 atmosphere 995.0 270 > th dose independent rect. 11 8
569 213.35 precipitation 0.1 270 < th dose independent rect. 17 20
570 213.35 precipitation 0.1 270 < th dose dependent rect. 17 20
596 213.65 atmosphere 995.0 10 > th dose independent rect. 15 15
598 213.67 temperature 10.0 270 > th dose dependent rect. 13 4
630 214.14 atmosphere 1015.0 270 < th dose independent rect. 18 6
632 214.20 atmosphere 995.0 270 > th dose independent rect. 12 6
654 214.53 atmosphere 995.0 270 > th dose independent rect. 13 4
656 214.54 atmosphere 1015.0 10 < th dose independent rect. 15 15
662 214.62 radiation 1.0 270 < th dose dependent rect. 24 15
681 214.70 humidity 50.0 270 > th dose independent rect. 17 20
749 215.16 radiation 1.0 270 > th dose independent rect. 13 5
771 215.36 radiation 20.0 10 < th dose dependent rect. 2 17
835 215.95 radiation 1.0 270 < th dose independent rect. 24 15
864 216.41 atmosphere 1015.0 270 < th dose independent rect. 13 16
868 216.47 temperature 10.0 270 > th dose dependent rect. 18 6
899 216.80 radiation 1.0 270 > th dose independent rect. 13 16
911 216.89 radiation 40.0 4320 < th dose dependent rect. 20 7
914 216.90 wind 1.0 10 > th dose independent rect. 6 9
916 216.92 wind 9.0 270 < th dose dependent rect. 23 7
929 216.96 temperature 10.0 1440 > th dose independent rect. 20 7
932 216.96 temperature 30.0 1440 < th dose independent rect. 20 7
936 216.96 humidity 50.0 1440 > th dose independent rect. 20 7
942 216.96 atmosphere 995.0 1440 > th dose independent rect. 20 7
943 216.96 radiation 1.0 1440 < th dose independent rect. 20 7
963 216.96 temperature 10.0 1440 > th dose independent rect. 3 17
991 217.22 wind 1.0 270 > th dose independent rect. 24 18