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Os10g0535800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function Cys-rich family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.27 (0.0368) R2 : 0.32
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.48 (0.175) R2dE : 0.124 R2E : -0.143
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.18 (0.0823) R2dN8 : 0.463 R2N8 : 0.196
σ : 0.679
deviance : 212.81
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C
peak time of C : --
E
wheather : wind
threshold : 0.7751
memory length : 4344
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.88
open length of G : 1.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
183.81 0.637 9.39 -0.971 0.32 2.24 -0.0664 -4.69 1.21 1.04 0.8713 4331 6 1.23
197.67 0.655 9.29 -0.686 0.394 1.85 -0.0511 -- 1.14 1.26 0.7997 4333 5.85 1.98
183.73 0.631 9.39 -0.983 0.318 2.25 -- -4.73 1.21 1.14 0.8375 4325 6 1.25
197.25 0.654 9.28 -0.624 0.337 1.76 -- -- 1.14 1.4 0.7964 4344 5.87 2
189.92 0.642 9.39 -0.988 -- 2.26 -- -4.82 1.22 -- 0.8134 4325 5.99 1.23
238.61 0.724 9.34 -0.199 0.325 -- 0.0374 -- 0.886 1.93 -- -- -- --
238.62 0.723 9.34 -0.2 0.325 -- -- -- 0.886 1.92 -- -- -- --
203.84 0.665 9.28 -0.619 -- 1.72 -- -- 1.15 -- 0.7125 4342 5.88 1.93
207.12 0.67 9.26 -- 0.312 1.66 -- -- 1.22 1.57 0.7624 4333 5.87 1.95
245.01 0.731 9.34 -0.186 -- -- -- -- 0.893 -- -- -- -- --
239.67 0.724 9.33 -- 0.322 -- -- -- 0.908 1.9 -- -- -- --
212.81 0.679 9.27 -- -- 1.48 -- -- 1.18 -- 0.7751 4344 5.88 1.9
245.93 0.732 9.33 -- -- -- -- -- 0.914 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 188.76 wind 1 4320 < th dose dependent rect. 6 1
3 195.76 temperature 30 4320 > th dose dependent rect. 8 1
17 198.84 temperature 30 4320 > th dose independent rect. 8 1
31 199.26 wind 1 4320 < th dose independent rect. 6 1
46 200.06 wind 1 4320 < th dose independent rect. 5 3
47 201.50 wind 1 4320 > th dose independent rect. 5 3
50 202.11 temperature 30 4320 < th dose independent rect. 8 1
51 202.27 temperature 30 4320 < th dose independent rect. 19 14
52 202.43 wind 1 1440 < th dose independent rect. 6 5
55 202.56 temperature 30 4320 < th dose independent rect. 24 9
63 203.35 humidity 90 14400 < th dose independent rect. 6 1
64 203.64 wind 1 1440 > th dose independent rect. 6 6
66 203.73 temperature 30 4320 < th dose independent rect. 3 6
67 203.77 wind 1 43200 < th dose dependent rect. 4 21
68 203.78 radiation 20 4320 > th dose independent rect. 6 2
88 204.05 radiation 10 4320 > th dose dependent rect. 17 14
90 204.20 wind 1 1440 < th dose dependent rect. 6 6
107 204.40 radiation 10 4320 > th dose dependent rect. 5 2
120 204.74 wind 1 43200 > th dose independent rect. 18 19
129 205.08 humidity 90 14400 > th dose independent rect. 6 1
172 206.88 radiation 40 4320 < th dose dependent rect. 18 11
173 206.90 wind 1 43200 > th dose independent rect. 5 7
177 207.14 humidity 90 14400 > th dose dependent rect. 5 8
178 207.15 wind 1 43200 < th dose independent rect. 19 18
179 207.18 wind 1 43200 > th dose independent rect. 4 9
186 207.32 humidity 90 14400 > th dose dependent rect. 3 18
193 207.48 humidity 90 14400 > th dose dependent sin 1 NA
201 207.57 wind 1 43200 < th dose independent rect. 17 20
226 207.90 radiation 30 4320 < th dose dependent rect. 18 3
259 208.34 radiation 30 4320 < th dose dependent rect. 18 8
268 208.40 humidity 90 14400 > th dose dependent rect. 6 1
269 208.41 humidity 80 14400 > th dose dependent rect. 2 9
284 208.55 wind 3 43200 < th dose dependent rect. 4 5
300 208.78 wind 3 43200 < th dose dependent rect. 4 3
304 208.79 wind 3 43200 < th dose dependent rect. 6 1
342 209.00 humidity 90 14400 > th dose independent rect. 2 13
382 209.32 humidity 90 14400 > th dose dependent rect. 9 1
392 209.40 wind 3 43200 < th dose dependent rect. 4 7
398 209.43 radiation 30 4320 < th dose independent rect. 3 5
400 209.44 radiation 30 4320 < th dose independent rect. 18 14
401 209.44 humidity 90 14400 > th dose dependent rect. 6 21
417 209.52 wind 1 43200 < th dose dependent rect. 9 23
426 209.57 humidity 80 43200 < th dose dependent rect. 5 2
438 209.62 humidity 90 14400 > th dose dependent rect. 18 2
443 209.64 temperature 20 4320 > th dose independent rect. 19 2
464 209.73 wind 1 43200 > th dose independent rect. 10 23
470 209.76 radiation 1 720 < th dose independent rect. 9 6
471 209.76 radiation 1 720 < th dose dependent rect. 9 6
477 209.80 radiation 1 1440 > th dose independent rect. 9 4
495 209.94 humidity 80 14400 > th dose independent rect. 9 2
498 209.94 wind 1 43200 < th dose dependent rect. 6 23
509 210.01 humidity 90 14400 > th dose dependent no NA NA
526 210.08 humidity 90 14400 > th dose dependent rect. 17 23
532 210.09 humidity 90 14400 > th dose dependent rect. 14 23
533 210.10 humidity 80 14400 < th dose independent rect. 9 2
545 210.14 humidity 90 14400 > th dose independent rect. 2 18
550 210.16 radiation 1 1440 < th dose independent rect. 10 2
551 210.16 radiation 1 1440 < th dose dependent rect. 10 2
573 210.22 wind 1 43200 < th dose dependent rect. 15 22
576 210.23 wind 1 43200 < th dose dependent rect. 24 23
609 210.28 wind 1 43200 < th dose dependent rect. 21 23
617 210.31 wind 1 43200 < th dose dependent rect. 19 23
618 210.32 humidity 90 14400 > th dose independent sin 3 NA
651 210.41 wind 1 43200 < th dose dependent no NA NA
655 210.42 humidity 90 14400 < th dose independent rect. 3 12
676 210.50 atmosphere 1005 30 > th dose dependent rect. 22 22
683 210.52 humidity 90 14400 < th dose independent rect. 3 9
761 210.74 wind 3 1440 < th dose independent rect. 8 1
765 210.76 wind 1 43200 < th dose dependent rect. 21 21
767 210.77 humidity 90 14400 > th dose dependent sin 18 NA
782 210.80 wind 1 43200 > th dose independent sin 4 NA
801 210.84 temperature 20 4320 < th dose independent rect. 19 2
803 210.85 radiation 10 4320 > th dose dependent rect. 17 1
835 210.93 wind 1 43200 < th dose independent rect. 3 23
843 210.95 humidity 80 14400 > th dose dependent rect. 19 17
896 211.15 wind 1 43200 > th dose independent rect. 3 23
909 211.18 wind 3 43200 < th dose dependent rect. 23 10
932 211.27 wind 1 43200 < th dose independent rect. 10 23
939 211.28 humidity 60 43200 < th dose dependent rect. 7 1
942 211.30 humidity 60 43200 > th dose independent rect. 5 3
947 211.33 humidity 90 14400 < th dose independent sin 3 NA
978 211.43 wind 1 43200 > th dose independent no NA NA
993 211.48 humidity 60 43200 < th dose independent rect. 5 3
1000 211.49 wind 3 43200 < th dose dependent rect. 23 12