Os10g0532800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0532800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.19 | 0.396 | 6.82 | 0.833 | 1.12 | -1.09 | 0.214 | -0.286 | 0.222 | 8.13 | 77.8 | 1121 | -- | -- |
| 71.27 | 0.393 | 6.82 | 0.855 | 1.12 | -1.11 | 0.261 | -- | 0.227 | 8.12 | 77.51 | 1119 | -- | -- |
| 71.31 | 0.393 | 6.83 | 0.834 | 1.12 | -1.09 | -- | -0.358 | 0.221 | 8.13 | 77.55 | 1118 | -- | -- |
| 71.46 | 0.394 | 6.82 | 0.863 | 1.11 | -1.13 | -- | -- | 0.223 | 8.12 | 77.36 | 1110 | -- | -- |
| 94.87 | 0.454 | 6.84 | 0.807 | -- | -1.8 | -- | -0.18 | 0.289 | -- | 89.97 | 758 | -- | -- |
| 96.9 | 0.461 | 6.8 | 0.657 | 1.28 | -- | 0.403 | -- | 0.279 | 8.77 | -- | -- | -- | -- |
| 97.44 | 0.462 | 6.8 | 0.67 | 1.28 | -- | -- | -- | 0.279 | 8.76 | -- | -- | -- | -- |
| 94.89 | 0.454 | 6.84 | 0.799 | -- | -1.84 | -- | -- | 0.275 | -- | 90 | 758 | -- | -- |
| 89.66 | 0.441 | 6.84 | -- | 1.02 | -1.07 | -- | -- | 0.174 | 8.06 | 85.63 | 1012 | -- | -- |
| 189.69 | 0.644 | 6.84 | 0.672 | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
| 109.29 | 0.489 | 6.82 | -- | 1.28 | -- | -- | -- | 0.205 | 8.72 | -- | -- | -- | -- |
| 110.89 | 0.49 | 6.85 | -- | -- | -1.91 | -- | -- | 0.233 | -- | 114.6 | 747 | -- | -- |
| 201.61 | 0.663 | 6.86 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.90 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 3 | 70.23 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 6 | 70.69 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 19 |
| 9 | 70.77 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 16 |
| 11 | 71.12 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 19 |
| 16 | 71.36 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 6 |
| 25 | 71.59 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 46 | 72.27 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 5 |
| 63 | 72.32 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 69 | 72.42 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 12 |
| 75 | 72.49 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 100 | 72.64 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 110 | 72.82 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 10 |
| 119 | 72.94 | humidity | 50 | 720 | > th | dose dependent | rect. | 5 | 17 |
| 137 | 73.04 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 138 | 73.05 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 12 |
| 142 | 73.08 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 153 | 73.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 192 | 73.22 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 282 | 73.43 | humidity | 80 | 1440 | < th | dose dependent | sin | 19 | NA |
| 391 | 73.67 | humidity | 70 | 720 | > th | dose independent | rect. | 5 | 16 |
| 398 | 73.68 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 407 | 73.68 | humidity | 80 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 409 | 73.69 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 413 | 73.69 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 415 | 73.70 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 12 |
| 425 | 73.71 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 10 |
| 428 | 73.71 | humidity | 60 | 1440 | > th | dose independent | rect. | 11 | 21 |
| 476 | 73.80 | humidity | 50 | 1440 | > th | dose dependent | sin | 21 | NA |
| 484 | 73.81 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 497 | 73.82 | humidity | 80 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 559 | 73.90 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 562 | 73.90 | humidity | 80 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 600 | 73.95 | humidity | 60 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 605 | 73.96 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 718 | 74.10 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 3 |
| 719 | 74.10 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 16 |
| 721 | 74.10 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 732 | 74.12 | temperature | 30 | 720 | < th | dose independent | sin | 12 | NA |
| 743 | 74.14 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 752 | 74.16 | temperature | 30 | 720 | > th | dose independent | sin | 12 | NA |
| 806 | 74.20 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 819 | 74.22 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 842 | 74.25 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 858 | 74.28 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 862 | 74.28 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 876 | 74.29 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 897 | 74.31 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 908 | 74.32 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 16 |
| 951 | 74.34 | humidity | 60 | 1440 | > th | dose independent | no | NA | NA |
| 973 | 74.34 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 986 | 74.35 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 18 |