Os10g0522400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0522400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 163.36 | 0.601 | 8.28 | -1.36 | 1.12 | 1.11 | 0.53 | 1.23 | 0.0277 | 20.9 | 29.6 | 1428 | -- | -- |
| 163.76 | 0.596 | 8.24 | -1.06 | 1.13 | 1.23 | 0.501 | -- | 0.0467 | 20.9 | 29.54 | 1406 | -- | -- |
| 163.79 | 0.596 | 8.26 | -1.41 | 1.13 | 1.1 | -- | 1.26 | 0.0778 | 20.8 | 29.5 | 1427 | -- | -- |
| 164.15 | 0.597 | 8.22 | -1.06 | 1.13 | 1.24 | -- | -- | 0.148 | 20.8 | 29.4 | 1409 | -- | -- |
| 235.77 | 0.715 | 8.24 | -1.47 | -- | 1.1 | -- | 1.47 | 0.0753 | -- | 29.5 | 1442 | -- | -- |
| 244.81 | 0.734 | 8.24 | -1.48 | 1.12 | -- | 0.452 | -- | 0.0794 | 20.4 | -- | -- | -- | -- |
| 245.45 | 0.734 | 8.24 | -1.49 | 1.12 | -- | -- | -- | 0.0798 | 20.4 | -- | -- | -- | -- |
| 236.82 | 0.717 | 8.22 | -1.08 | -- | 1.22 | -- | -- | 0.0671 | -- | 29.6 | 1440 | -- | -- |
| 192.5 | 0.646 | 8.2 | -- | 1.14 | 1.4 | -- | -- | 0.279 | 20.8 | 29.5 | 1423 | -- | -- |
| 314.77 | 0.829 | 8.21 | -1.5 | -- | -- | -- | -- | 0.0684 | -- | -- | -- | -- | -- |
| 303.99 | 0.816 | 8.2 | -- | 1.12 | -- | -- | -- | 0.246 | 20.3 | -- | -- | -- | -- |
| 265.7 | 0.759 | 8.18 | -- | -- | 1.4 | -- | -- | 0.195 | -- | 29.59 | 1440 | -- | -- |
| 373.81 | 0.902 | 8.17 | -- | -- | -- | -- | -- | 0.234 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 35 | 162.51 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 47 | 162.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 54 | 163.23 | temperature | 25 | 1440 | > th | dose dependent | sin | 6 | NA |
| 61 | 163.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 78 | 163.79 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 89 | 164.04 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 92 | 164.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 98 | 164.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 100 | 164.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 139 | 164.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 145 | 164.91 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 187 | 165.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 216 | 165.57 | temperature | 30 | 1440 | < th | dose independent | sin | 3 | NA |
| 268 | 166.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 286 | 166.31 | temperature | 30 | 1440 | > th | dose independent | sin | 2 | NA |
| 293 | 166.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 294 | 166.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 295 | 166.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 304 | 166.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 335 | 166.57 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 338 | 166.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 15 |
| 387 | 166.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 23 |
| 389 | 166.63 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 399 | 166.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 21 |
| 425 | 166.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 516 | 166.86 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 528 | 166.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 633 | 167.21 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 740 | 167.23 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 866 | 168.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 12 |
| 868 | 168.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 8 |
| 869 | 168.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 10 |
| 877 | 168.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 19 |