Os10g0522000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os10g0522000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.07 | 0.506 | 10.9 | -1.79 | 1.82 | -1.51 | -0.541 | -1.46 | -0.707 | 16.6 | 82.28 | 745 | 17.8 | 4.21 |
| 117.95 | 0.506 | 10.9 | -1.71 | 1.73 | -1.53 | -0.367 | -- | -0.667 | 16.8 | 84.48 | 737 | 17.8 | 4.47 |
| 115.98 | 0.502 | 10.9 | -1.79 | 1.8 | -1.5 | -- | -0.925 | -0.687 | 16.8 | 84 | 740 | 17.7 | 4.35 |
| 117.37 | 0.505 | 10.9 | -1.68 | 1.73 | -1.58 | -- | -- | -0.671 | 16.8 | 84.65 | 736 | 17.7 | 4.65 |
| 168.29 | 0.604 | 10.9 | -1.73 | -- | -2.25 | -- | -0.252 | -0.78 | -- | 104.6 | 814 | 18.2 | 5.3 |
| 190.6 | 0.647 | 10.8 | -1.69 | 2.41 | -- | -0.0432 | -- | -0.487 | 16.2 | -- | -- | -- | -- |
| 190.61 | 0.647 | 10.8 | -1.69 | 2.41 | -- | -- | -- | -0.487 | 16.2 | -- | -- | -- | -- |
| 134.29 | 0.54 | 10.8 | -1.77 | -- | -3.39 | -- | -- | -0.396 | -- | 111.6 | 729 | 17.4 | 10 |
| 194.32 | 0.649 | 10.9 | -- | 1.82 | -1.63 | -- | -- | -0.565 | 16.6 | 82.82 | 780 | 17.6 | 4.05 |
| 504.57 | 1.05 | 10.8 | -1.79 | -- | -- | -- | -- | -0.551 | -- | -- | -- | -- | -- |
| 265.81 | 0.763 | 10.8 | -- | 2.44 | -- | -- | -- | -0.299 | 16.1 | -- | -- | -- | -- |
| 194.41 | 0.649 | 10.8 | -- | -- | -3.32 | -- | -- | -0.321 | -- | 129.2 | 881 | 14.8 | 14 |
| 588.73 | 1.13 | 10.8 | -- | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.72 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 4 |
| 5 | 118.78 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 23 | 119.63 | humidity | 70.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 80 | 123.39 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 95 | 124.47 | wind | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 100 | 125.62 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 105 | 126.01 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 107 | 126.17 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 118 | 127.23 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 121 | 127.36 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 136 | 127.66 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 143 | 127.97 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 170 | 128.71 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 174 | 128.77 | wind | 3.0 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 175 | 128.81 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 177 | 128.96 | humidity | 80.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 180 | 129.04 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 202 | 129.50 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 212 | 130.25 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 244 | 130.89 | humidity | 70.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 263 | 131.77 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 267 | 131.92 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 292 | 132.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 311 | 133.05 | humidity | 90.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 317 | 133.17 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 347 | 133.64 | wind | 3.0 | 10 | < th | dose dependent | rect. | 3 | 7 |
| 356 | 133.96 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 362 | 134.12 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 375 | 134.37 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 381 | 134.51 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 399 | 134.66 | humidity | 70.0 | 720 | > th | dose independent | sin | 11 | NA |
| 400 | 134.67 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 411 | 135.06 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 415 | 135.14 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 422 | 135.29 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 454 | 135.46 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 479 | 135.70 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 581 | 137.55 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 583 | 137.62 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 617 | 138.16 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 618 | 138.17 | wind | 5.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 627 | 138.23 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 23 |
| 629 | 138.23 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 647 | 138.27 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 12 | NA |
| 648 | 138.28 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 668 | 138.42 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 22 |
| 695 | 138.64 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 696 | 138.64 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 699 | 138.69 | humidity | 70.0 | 720 | < th | dose independent | sin | 11 | NA |
| 708 | 138.76 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 2 |
| 709 | 138.76 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 715 | 138.82 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 721 | 138.94 | temperature | 25.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 724 | 138.96 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 732 | 139.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 734 | 139.16 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 735 | 139.16 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 738 | 139.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 739 | 139.16 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 754 | 139.24 | wind | 5.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 763 | 139.30 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 773 | 139.37 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 775 | 139.38 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 794 | 139.55 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 800 | 139.63 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 801 | 139.63 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 803 | 139.64 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 806 | 139.65 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 807 | 139.65 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 839 | 139.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 845 | 139.74 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 846 | 139.76 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 849 | 139.77 | temperature | 10.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 852 | 139.77 | humidity | 50.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 855 | 139.77 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 856 | 139.77 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 865 | 139.78 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 876 | 139.87 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 879 | 139.90 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 888 | 139.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 891 | 139.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 896 | 139.95 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 19 | 18 |
| 899 | 139.99 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 922 | 140.08 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 16 |
| 940 | 140.13 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 2 |
| 958 | 140.20 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 979 | 140.26 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 13 |