Os10g0520600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UAS domain containing protein.
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Os10g0520600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UAS domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.88 | 0.204 | 11.1 | 0.871 | 0.0972 | -0.455 | 0.409 | 3.63 | 0.106 | 9.98 | 25.49 | 818 | -- | -- |
| 22.02 | 0.219 | 11.1 | 0.271 | 0.166 | -0.105 | 0.0458 | -- | -0.023 | 8.86 | 23.32 | 915 | -- | -- |
| 19.41 | 0.205 | 11.1 | 0.864 | 0.0999 | -0.475 | -- | 3.66 | 0.0831 | 9.9 | 26.2 | 843 | -- | -- |
| 22 | 0.218 | 11.1 | 0.263 | 0.148 | -0.113 | -- | -- | -0.0345 | 8.79 | 23.67 | 884 | -- | -- |
| 19.89 | 0.208 | 11.1 | 0.864 | -- | -0.515 | -- | 3.46 | 0.0948 | -- | 25.73 | 826 | -- | -- |
| 22.28 | 0.221 | 11.1 | 0.232 | 0.184 | -- | 0.0729 | -- | -0.0485 | 9.02 | -- | -- | -- | -- |
| 22.3 | 0.221 | 11.1 | 0.235 | 0.185 | -- | -- | -- | -0.0486 | 8.93 | -- | -- | -- | -- |
| 22.94 | 0.223 | 11.1 | 0.284 | -- | -0.214 | -- | -- | -0.0269 | -- | 24.5 | 790 | -- | -- |
| 23.33 | 0.226 | 11.2 | -- | 0.196 | 0.16 | -- | -- | -0.0886 | 7.56 | 24.5 | 892 | -- | -- |
| 24.25 | 0.23 | 11.1 | 0.235 | -- | -- | -- | -- | -0.0474 | -- | -- | -- | -- | -- |
| 23.75 | 0.228 | 11.1 | -- | 0.185 | -- | -- | -- | -0.0747 | 8.83 | -- | -- | -- | -- |
| 24.62 | 0.231 | 11.2 | -- | -- | 0.153 | -- | -- | -0.137 | -- | 26.2 | 47520 | -- | -- |
| 25.7 | 0.237 | 11.2 | -- | -- | -- | -- | -- | -0.0734 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.69 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 10 |
| 2 | 18.75 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 7 |
| 5 | 18.94 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 6 | 18.97 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 14 | 18.98 | temperature | 25 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 30 | 19.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 41 | 19.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 44 | 19.02 | temperature | 25 | 720 | > th | dose dependent | sin | 19 | NA |
| 54 | 19.03 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 64 | 19.03 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 73 | 19.04 | temperature | 25 | 720 | > th | dose dependent | rect. | 4 | 21 |
| 80 | 19.04 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 94 | 19.05 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 111 | 19.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 119 | 19.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 216 | 19.40 | radiation | 20 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 218 | 19.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 221 | 19.41 | radiation | 20 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 223 | 19.42 | temperature | 25 | 720 | > th | dose independent | rect. | 9 | 12 |
| 254 | 19.53 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 10 |
| 255 | 19.53 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 269 | 19.55 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 3 |
| 273 | 19.56 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 7 |
| 275 | 19.56 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 280 | 19.57 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 5 |
| 296 | 19.61 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 16 |
| 300 | 19.62 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 3 |
| 333 | 19.67 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 5 |
| 371 | 19.70 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 378 | 19.70 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 391 | 19.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 10 |
| 427 | 19.75 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 11 |
| 429 | 19.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 5 |
| 444 | 19.76 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 8 |
| 450 | 19.77 | radiation | 20 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 451 | 19.77 | temperature | 25 | 30 | < th | dose independent | rect. | 24 | 10 |
| 458 | 19.77 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 462 | 19.78 | temperature | 25 | 720 | < th | dose independent | sin | 20 | NA |
| 470 | 19.78 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 498 | 19.81 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 7 |
| 504 | 19.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 521 | 19.83 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 522 | 19.83 | temperature | 30 | 720 | > th | dose independent | rect. | 13 | 1 |
| 547 | 19.85 | radiation | 10 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 602 | 19.89 | temperature | 30 | 720 | > th | dose independent | sin | 6 | NA |
| 619 | 19.90 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 4 |
| 651 | 19.92 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 666 | 19.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 675 | 19.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 19 |
| 681 | 19.94 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 9 |
| 686 | 19.94 | temperature | 25 | 4320 | > th | dose dependent | sin | 14 | NA |
| 688 | 19.94 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 698 | 19.94 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 699 | 19.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 707 | 19.95 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 1 |
| 708 | 19.95 | humidity | 70 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 712 | 19.95 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 716 | 19.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 720 | 19.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 13 |
| 729 | 19.96 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 7 |
| 737 | 19.96 | temperature | 15 | 270 | > th | dose dependent | sin | 16 | NA |
| 741 | 19.96 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 751 | 19.96 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 6 |
| 755 | 19.96 | temperature | 25 | 4320 | > th | dose dependent | rect. | 15 | 9 |
| 759 | 19.96 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 782 | 19.97 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 791 | 19.97 | temperature | 25 | 270 | > th | dose dependent | sin | 13 | NA |
| 794 | 19.97 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |
| 806 | 19.97 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 9 |
| 820 | 19.98 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 861 | 19.99 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 2 |
| 862 | 19.99 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 876 | 19.99 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 905 | 20.00 | humidity | 70 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 906 | 20.00 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 7 |
| 912 | 20.00 | temperature | 25 | 90 | > th | dose independent | rect. | 11 | 12 |
| 925 | 20.00 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 10 |
| 934 | 20.00 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 961 | 20.01 | temperature | 25 | 720 | > th | dose dependent | sin | 9 | NA |
| 964 | 20.01 | temperature | 20 | 10 | > th | dose dependent | sin | 14 | NA |
| 966 | 20.01 | temperature | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 967 | 20.01 | radiation | 30 | 30 | < th | dose dependent | sin | 9 | NA |
| 983 | 20.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 12 |
| 996 | 20.02 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 999 | 20.02 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |