Os10g0516600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF604 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0516600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF604 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.51 | 0.516 | 3.28 | -0.108 | 0.196 | 4.97 | -0.567 | -21.1 | -0.0883 | 4.28 | 18.14 | 31 | 0.326 | 11.1 |
| 144 | 0.559 | 3.29 | -0.163 | 0.201 | 3.05 | -1.34 | -- | -0.0732 | 3.68 | 18.63 | 28 | 1.28 | 10.3 |
| 120.93 | 0.512 | 3.28 | -0.0961 | 0.205 | 5.4 | -- | -23.4 | -0.0784 | 5.26 | 18.12 | 30 | 0.333 | 11.2 |
| 145.76 | 0.562 | 3.29 | -0.136 | 0.211 | 2.74 | -- | -- | -0.097 | 4.32 | 18.6 | 37 | 0.046 | 11.3 |
| 123.1 | 0.517 | 3.28 | -0.0943 | -- | 5.52 | -- | -23.4 | -0.0782 | -- | 18.13 | 29 | 0.313 | 11.1 |
| 161.3 | 0.595 | 3.3 | -0.231 | 0.283 | -- | -1.39 | -- | -0.145 | 3.85 | -- | -- | -- | -- |
| 166.63 | 0.604 | 3.3 | -0.212 | 0.292 | -- | -- | -- | -0.138 | 4.84 | -- | -- | -- | -- |
| 147.65 | 0.566 | 3.29 | -0.114 | -- | 2.92 | -- | -- | -0.0888 | -- | 18.6 | 37 | 0.0724 | 11.3 |
| 145.98 | 0.563 | 3.29 | -- | 0.205 | 2.81 | -- | -- | -0.0881 | 5.37 | 18.6 | 37 | 0.11 | 11.3 |
| 171.13 | 0.611 | 3.3 | -0.201 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 167.81 | 0.606 | 3.29 | -- | 0.288 | -- | -- | -- | -0.114 | 4.86 | -- | -- | -- | -- |
| 147.99 | 0.567 | 3.29 | -- | -- | 2.95 | -- | -- | -0.0756 | -- | 18.6 | 37 | 0.0181 | 11.2 |
| 172.2 | 0.613 | 3.29 | -- | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.79 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 1 | 4 |
| 4 | 133.82 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 134.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 15 | 134.20 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 56 | 138.06 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 3 |
| 66 | 138.86 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 1 |
| 97 | 141.25 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 99 | 141.63 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 132 | 144.43 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 143 | 144.70 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 145 | 144.72 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 7 | 7 |
| 153 | 144.72 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 7 | 7 |
| 163 | 144.80 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 179 | 144.80 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 197 | 144.82 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 7 | 1 |
| 204 | 144.82 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 211 | 144.83 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 222 | 144.97 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 324 | 146.07 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 1 |
| 362 | 146.07 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 467 | 147.92 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 4 |
| 560 | 149.03 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 570 | 149.03 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 595 | 149.31 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 7 | 19 |
| 599 | 149.31 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 605 | 149.34 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 4 |
| 607 | 149.34 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 4 |
| 635 | 149.51 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 13 | 2 |
| 743 | 150.73 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 782 | 150.80 | humidity | 70.0 | 30 | < th | dose independent | rect. | 19 | 1 |
| 796 | 150.83 | wind | 1.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 801 | 150.90 | temperature | 30.0 | 90 | > th | dose independent | rect. | 12 | 3 |
| 814 | 151.06 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 817 | 151.12 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 818 | 151.13 | temperature | 30.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 831 | 151.23 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 19 |
| 832 | 151.25 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 851 | 151.32 | humidity | 60.0 | 90 | < th | dose independent | rect. | 12 | 3 |
| 855 | 151.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 5 |
| 943 | 151.49 | radiation | 40.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 955 | 151.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 23 | 4 |
| 957 | 151.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 22 |