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Os10g0516300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial precursor (EC 1.5.5.1) (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring- flavoprotein dehydrogenase) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.35 | 0.459 | 8.9 | -0.889 | 1.25 | -0.73 | -0.936 | -1.63 | -0.342 | 19.1 | 998.7 | 11632 | -- | -- |
| 96.27 | 0.457 | 8.89 | -0.811 | 1.21 | -1.01 | -1.13 | -- | -0.347 | 19 | 998.8 | 11820 | -- | -- |
| 97.6 | 0.46 | 8.9 | -0.863 | 1.25 | -0.752 | -- | -1.54 | -0.346 | 19 | 998.7 | 11719 | -- | -- |
| 98.1 | 0.461 | 8.88 | -0.766 | 1.24 | -1.07 | -- | -- | -0.36 | 19 | 998.9 | 11857 | -- | -- |
| 179.15 | 0.623 | 8.87 | -0.867 | -- | -0.772 | -- | -1.37 | -0.362 | -- | 998.7 | 11698 | -- | -- |
| 122.79 | 0.519 | 8.86 | -1.02 | 1.24 | -- | -0.968 | -- | -0.258 | 19.1 | -- | -- | -- | -- |
| 125.21 | 0.524 | 8.86 | -0.999 | 1.24 | -- | -- | -- | -0.259 | 19 | -- | -- | -- | -- |
| 179.6 | 0.624 | 8.86 | -0.785 | -- | -1.04 | -- | -- | -0.38 | -- | 998.9 | 11844 | -- | -- |
| 112.6 | 0.494 | 8.87 | -- | 1.25 | -1.22 | -- | -- | -0.308 | 18.9 | 999 | 12550 | -- | -- |
| 205.87 | 0.67 | 8.83 | -1.02 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 151.53 | 0.576 | 8.84 | -- | 1.25 | -- | -- | -- | -0.148 | 19 | -- | -- | -- | -- |
| 195.48 | 0.651 | 8.84 | -- | -- | -1.21 | -- | -- | -0.326 | -- | 998.9 | 12589 | -- | -- |
| 233.54 | 0.713 | 8.81 | -- | -- | -- | -- | -- | -0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.62 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 2 | 85.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 3 | 85.21 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 26 | 85.67 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 29 | 85.68 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 69 | 85.75 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 127 | 86.17 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 128 | 86.21 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 158 | 86.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 159 | 86.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 161 | 86.86 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 162 | 86.86 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 172 | 86.94 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 218 | 88.37 | temperature | 30.0 | 30 | < th | dose dependent | sin | 3 | NA |
| 221 | 88.46 | temperature | 15.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 294 | 91.04 | temperature | 25.0 | 10 | < th | dose dependent | sin | 0 | NA |
| 309 | 91.94 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 312 | 92.10 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 326 | 92.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 335 | 93.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 339 | 93.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 13 |
| 370 | 94.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 385 | 94.58 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 388 | 94.59 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 391 | 94.63 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 16 |
| 396 | 94.70 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 420 | 95.04 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 422 | 95.05 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 424 | 95.08 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 426 | 95.10 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 449 | 95.33 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 453 | 95.39 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 457 | 95.45 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 458 | 95.46 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 465 | 95.55 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 470 | 95.61 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 471 | 95.62 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 485 | 95.76 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 491 | 95.79 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 500 | 95.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 512 | 96.00 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 566 | 96.35 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 9 |
| 570 | 96.37 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 594 | 96.52 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 608 | 96.67 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 611 | 96.68 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 615 | 96.71 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 627 | 96.77 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 630 | 96.78 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 650 | 96.83 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 668 | 96.87 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 681 | 96.90 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 714 | 96.95 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 720 | 96.96 | atmosphere | 1005.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 730 | 96.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 735 | 96.98 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 738 | 96.98 | atmosphere | 1005.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 814 | 97.05 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 913 | 97.18 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 919 | 97.19 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 952 | 97.24 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 10 | NA |
