Os10g0515000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0515000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.62 | 0.654 | 7.24 | -1.26 | 0.798 | 1.33 | 1.15 | -1.72 | -2.41 | 2.97 | 25.7 | 10 | -- | -- |
| 197.54 | 0.66 | 7.27 | -1.54 | 0.772 | 1.45 | 0.542 | -- | -2.47 | 3.08 | 25.7 | 10 | -- | -- |
| 196.94 | 0.659 | 7.26 | -1.41 | 0.79 | 1.39 | -- | -0.934 | -2.44 | 3.01 | 25.7 | 10 | -- | -- |
| 198.39 | 0.656 | 7.27 | -1.54 | 0.765 | 1.47 | -- | -- | -2.46 | 2.98 | 25.7 | 17 | -- | -- |
| 221.76 | 0.694 | 7.23 | -1.31 | -- | 1.97 | -- | -0.575 | -2.3 | -- | 26.8 | 6 | -- | -- |
| 229.38 | 0.71 | 7.35 | -1.88 | 1.09 | -- | 0.534 | -- | -2.78 | 2.63 | -- | -- | -- | -- |
| 230.38 | 0.711 | 7.35 | -1.89 | 1.09 | -- | -- | -- | -2.78 | 2.6 | -- | -- | -- | -- |
| 222.32 | 0.694 | 7.24 | -1.39 | -- | 2 | -- | -- | -2.32 | -- | 26.8 | 6 | -- | -- |
| 255.47 | 0.744 | 7.22 | -- | 0.643 | 2.03 | -- | -- | -2.19 | 3.33 | 25.77 | 20 | -- | -- |
| 300.22 | 0.81 | 7.34 | -1.84 | -- | -- | -- | -- | -2.75 | -- | -- | -- | -- | -- |
| 324.48 | 0.843 | 7.3 | -- | 1.06 | -- | -- | -- | -2.57 | 2.58 | -- | -- | -- | -- |
| 269.33 | 0.764 | 7.19 | -- | -- | 2.43 | -- | -- | -2.08 | -- | 26.67 | 17 | -- | -- |
| 389.82 | 0.922 | 7.29 | -- | -- | -- | -- | -- | -2.55 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 2 | 189.10 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 7 | 190.46 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 11 | 190.79 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 18 | 191.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 19 | 191.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 20 | 191.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 21 | 191.71 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 12 |
| 23 | 191.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 24 | 191.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 28 | 192.20 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 29 | 192.20 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 35 | 192.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 46 | 192.69 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 48 | 192.75 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 59 | 192.95 | temperature | 25.0 | 30 | < th | dose independent | sin | 10 | NA |
| 60 | 193.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 62 | 193.08 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 8 |
| 65 | 193.15 | temperature | 25.0 | 30 | > th | dose independent | sin | 10 | NA |
| 66 | 193.21 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 67 | 193.22 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 69 | 193.29 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 70 | 193.29 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 77 | 193.44 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 87 | 193.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 88 | 193.64 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 89 | 193.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 91 | 193.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 99 | 193.74 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 100 | 193.74 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 4 |
| 118 | 193.95 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 147 | 194.19 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 4 |
| 157 | 194.27 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 159 | 194.28 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 181 | 194.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 184 | 194.50 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 200 | 194.63 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 202 | 194.64 | temperature | 25.0 | 30 | < th | dose independent | rect. | 11 | 19 |
| 221 | 194.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 229 | 194.95 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 249 | 195.14 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 256 | 195.21 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 258 | 195.23 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 259 | 195.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 262 | 195.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 263 | 195.26 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 265 | 195.27 | temperature | 25.0 | 10 | < th | dose dependent | no | NA | NA |
| 271 | 195.32 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 284 | 195.46 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 286 | 195.47 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 312 | 195.68 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 321 | 195.71 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 368 | 195.95 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 370 | 195.95 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 375 | 195.96 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 409 | 196.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 416 | 196.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 423 | 196.21 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 425 | 196.21 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 440 | 196.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 446 | 196.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 447 | 196.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 458 | 196.35 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 460 | 196.35 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 464 | 196.36 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 465 | 196.37 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 512 | 196.61 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 564 | 196.92 | wind | 5.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 569 | 196.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 577 | 197.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 578 | 197.03 | temperature | 25.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 601 | 197.16 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 616 | 197.20 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 644 | 197.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 718 | 197.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 721 | 197.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 724 | 197.60 | wind | 1.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 788 | 197.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 807 | 197.88 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 824 | 197.94 | temperature | 25.0 | 30 | < th | dose independent | rect. | 18 | 12 |
| 864 | 198.08 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 866 | 198.08 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 882 | 198.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 929 | 198.31 | temperature | 20.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 997 | 198.54 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |