Os10g0514400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphoenolpyruvate carboxykinase [ATP] 1 (EC 4.1.1.49).
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Os10g0514400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphoenolpyruvate carboxykinase [ATP] 1 (EC 4.1.1.49).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.97 | 0.467 | 8.82 | 1.41 | 1.08 | -1.42 | -0.663 | 2.81 | -0.596 | 21.2 | 17.4 | 4432 | -- | -- |
| 106.56 | 0.481 | 8.89 | 1.24 | 1.04 | -1.75 | -1 | -- | -0.537 | 21 | 10.37 | 11237 | -- | -- |
| 100.35 | 0.467 | 8.81 | 1.47 | 1.08 | -1.4 | -- | 2.94 | -0.589 | 21.1 | 17.9 | 4574 | -- | -- |
| 106.38 | 0.48 | 8.88 | 1.06 | 1.1 | -1.7 | -- | -- | -0.567 | 21.3 | 10.85 | 10968 | -- | -- |
| 167.99 | 0.604 | 8.79 | 1.46 | -- | -1.39 | -- | 2.91 | -0.6 | -- | 17.3 | 4474 | -- | -- |
| 152.1 | 0.578 | 9 | -0.0111 | 1.07 | -- | -0.764 | -- | -1.1 | 21 | -- | -- | -- | -- |
| 154.12 | 0.581 | 9 | 0.0156 | 1.07 | -- | -- | -- | -1.1 | 21 | -- | -- | -- | -- |
| 174.08 | 0.615 | 8.85 | 1.1 | -- | -1.69 | -- | -- | -0.543 | -- | -48.88 | 11543 | -- | -- |
| 118.18 | 0.506 | 8.96 | -- | 1.08 | -1.19 | -- | -- | -0.931 | 21.2 | 15.5 | 4522 | -- | -- |
| 220.23 | 0.693 | 8.97 | 0.0172 | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
| 154.13 | 0.581 | 9 | -- | 1.07 | -- | -- | -- | -1.11 | 21 | -- | -- | -- | -- |
| 185.58 | 0.634 | 8.93 | -- | -- | -1.18 | -- | -- | -0.935 | -- | 15.1 | 4444 | -- | -- |
| 220.24 | 0.693 | 8.97 | -- | -- | -- | -- | -- | -1.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.16 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 2 | 96.89 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 3 | 97.04 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 6 | 97.16 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 7 | 97.21 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 9 | 97.29 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 14 |
| 10 | 97.35 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 14 |
| 11 | 97.35 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 12 | 97.38 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 3 |
| 29 | 97.52 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 31 | 97.53 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 38 | 97.58 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 47 | 97.82 | temperature | 20 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 57 | 97.99 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 69 | 98.00 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 70 | 98.00 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 75 | 98.04 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 106 | 98.18 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 18 |
| 109 | 98.21 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 130 | 98.30 | radiation | 10 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 133 | 98.31 | radiation | 30 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 134 | 98.32 | humidity | 60 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 137 | 98.33 | temperature | 20 | 43200 | < th | dose independent | rect. | 17 | 7 |
| 143 | 98.35 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 149 | 98.37 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 161 | 98.39 | temperature | 15 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 162 | 98.40 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 167 | 98.41 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 2 |
| 172 | 98.42 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 187 | 98.45 | wind | 9 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 241 | 98.57 | temperature | 20 | 43200 | < th | dose independent | sin | 17 | NA |
| 271 | 98.62 | temperature | 20 | 43200 | > th | dose independent | sin | 17 | NA |
| 285 | 98.63 | temperature | 20 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 403 | 98.78 | radiation | 1 | 14400 | > th | dose independent | sin | 8 | NA |
| 448 | 98.84 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 461 | 98.86 | temperature | 20 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 464 | 98.86 | temperature | 20 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 470 | 98.86 | temperature | 20 | 43200 | < th | dose independent | rect. | 13 | 21 |
| 482 | 98.87 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 506 | 98.88 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 522 | 98.89 | temperature | 20 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 525 | 98.89 | temperature | 20 | 43200 | < th | dose dependent | sin | 10 | NA |
| 541 | 98.91 | temperature | 20 | 43200 | > th | dose independent | rect. | 13 | 22 |
| 548 | 98.91 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 549 | 98.91 | temperature | 20 | 43200 | < th | dose independent | rect. | 23 | 23 |
| 569 | 98.92 | temperature | 20 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 573 | 98.92 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 579 | 98.93 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 592 | 98.93 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 602 | 98.94 | temperature | 20 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 620 | 98.95 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 23 |
| 623 | 98.95 | temperature | 20 | 43200 | > th | dose independent | rect. | 23 | 23 |
| 653 | 98.97 | radiation | 1 | 14400 | < th | dose independent | sin | 8 | NA |
| 670 | 98.97 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 690 | 98.99 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 717 | 99.00 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 13 |
| 727 | 99.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 759 | 99.03 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 827 | 99.07 | temperature | 10 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 879 | 99.11 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 979 | 99.18 | temperature | 20 | 43200 | < th | dose independent | sin | 4 | NA |