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Os10g0513300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF677 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.015) R2 : 0.118
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.247 (0.0316) R2dN8 : 0.153 R2N8 : 0.118
σ : 0.283
deviance : 36.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.71 0.186 11.3 0.0819 0.535 0.351 -0.0617 -0.456 0.162 8.27 20.8 820 -- --
16.24 0.188 11.3 0.174 0.54 0.392 0.0882 -- 0.182 8.29 20.86 833 -- --
15.7 0.185 11.3 0.0724 0.536 0.344 -- -0.47 0.157 8.27 21.04 833 -- --
16.27 0.188 11.3 0.177 0.54 0.392 -- -- 0.183 8.28 20.83 833 -- --
29.42 0.253 11.3 -0.00866 -- 0.321 -- -0.623 0.117 -- 21.4 2741 -- --
20.83 0.214 11.2 0.326 0.488 -- 0.0684 -- 0.278 8.02 -- -- -- --
20.84 0.214 11.2 0.328 0.488 -- -- -- 0.278 8.01 -- -- -- --
29.67 0.254 11.3 0.024 -- 0.526 -- -- 0.164 -- 19 4192 -- --
17.02 0.192 11.3 -- 0.535 0.429 -- -- 0.166 8.29 20.9 858 -- --
33.84 0.272 11.2 0.332 -- -- -- -- 0.284 -- -- -- -- --
23.67 0.228 11.2 -- 0.49 -- -- -- 0.242 7.96 -- -- -- --
29.68 0.254 11.3 -- -- 0.542 -- -- 0.158 -- 18.9 4217 -- --
36.75 0.283 11.3 -- -- -- -- -- 0.247 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.44 temperature 15.0 10 > th dose dependent sin 5 NA
5 15.58 temperature 30.0 270 < th dose dependent rect. 23 16
8 15.66 temperature 25.0 720 < th dose dependent rect. 19 18
34 15.76 temperature 30.0 10 < th dose dependent sin 4 NA
41 15.78 temperature 25.0 720 < th dose dependent sin 9 NA
44 15.79 temperature 20.0 720 > th dose independent rect. 20 20
80 15.87 temperature 30.0 10 < th dose dependent rect. 24 17
101 15.95 temperature 20.0 720 < th dose independent rect. 21 20
103 15.95 temperature 15.0 720 > th dose dependent rect. 20 13
108 15.96 wind 3.0 43200 > th dose dependent rect. 1 1
123 15.98 radiation 20.0 14400 < th dose independent rect. 1 5
134 15.99 temperature 15.0 720 > th dose dependent rect. 21 11
191 16.08 temperature 20.0 720 > th dose independent rect. 12 23
194 16.08 temperature 25.0 720 < th dose dependent no NA NA
200 16.09 temperature 20.0 720 > th dose independent rect. 10 23
205 16.10 temperature 20.0 720 > th dose independent rect. 4 23
218 16.11 temperature 20.0 720 > th dose independent rect. 2 23
242 16.14 temperature 20.0 720 > th dose independent no NA NA
279 16.16 temperature 10.0 720 > th dose dependent rect. 22 9
299 16.17 temperature 25.0 720 < th dose dependent rect. 10 23
312 16.19 temperature 20.0 720 < th dose independent no NA NA
315 16.19 temperature 20.0 720 > th dose independent rect. 15 23
339 16.21 temperature 20.0 720 > th dose independent rect. 6 23
340 16.21 temperature 20.0 720 < th dose independent rect. 8 23
342 16.21 temperature 15.0 720 > th dose dependent sin 10 NA
347 16.22 temperature 20.0 720 > th dose independent rect. 23 23
348 16.22 temperature 20.0 720 < th dose independent rect. 6 23
352 16.23 temperature 20.0 4320 < th dose independent rect. 20 1
377 16.25 wind 9.0 43200 < th dose dependent rect. 1 2
405 16.27 wind 1.0 43200 > th dose dependent rect. 23 5
420 16.29 wind 9.0 43200 > th dose independent rect. 22 1
448 16.30 wind 9.0 43200 > th dose dependent rect. 21 2
456 16.31 wind 1.0 43200 > th dose dependent rect. 22 7
465 16.32 humidity 90.0 43200 > th dose independent rect. 12 2
467 16.32 humidity 70.0 43200 < th dose independent rect. 18 14
481 16.33 humidity 90.0 43200 > th dose dependent rect. 11 5
488 16.34 wind 9.0 43200 < th dose independent rect. 21 8
493 16.34 wind 7.0 43200 > th dose dependent rect. 21 8
499 16.35 wind 7.0 43200 < th dose independent rect. 23 1
516 16.36 wind 9.0 43200 > th dose independent rect. 21 3
517 16.36 humidity 90.0 43200 < th dose independent rect. 11 3
518 16.36 wind 9.0 43200 > th dose independent rect. 21 7
519 16.36 humidity 70.0 43200 > th dose independent rect. 18 14
530 16.36 wind 9.0 43200 < th dose dependent rect. 23 6
543 16.37 wind 7.0 43200 < th dose independent rect. 22 6
558 16.38 humidity 70.0 43200 > th dose independent rect. 19 10
573 16.38 humidity 90.0 14400 > th dose dependent rect. 2 17
574 16.38 humidity 90.0 14400 > th dose dependent rect. 1 19
589 16.39 wind 7.0 43200 > th dose dependent rect. 21 4
592 16.39 precipitation 0.1 43200 > th dose dependent rect. 5 8
594 16.39 humidity 90.0 14400 > th dose dependent rect. 2 15
600 16.40 humidity 70.0 43200 > th dose independent rect. 19 7
603 16.40 precipitation 0.1 43200 > th dose independent rect. 5 8
605 16.40 humidity 70.0 43200 < th dose independent rect. 18 10
620 16.40 humidity 90.0 43200 > th dose dependent rect. 9 7
622 16.40 temperature 30.0 4320 < th dose dependent rect. 6 9
629 16.41 temperature 20.0 720 < th dose independent sin 7 NA
633 16.41 wind 9.0 43200 < th dose independent rect. 21 3
638 16.41 humidity 70.0 43200 < th dose independent rect. 18 8
675 16.42 precipitation 0.1 43200 < th dose independent rect. 5 8
688 16.42 temperature 25.0 4320 < th dose dependent rect. 7 2
696 16.42 precipitation 0.1 43200 < th dose dependent rect. 5 8
712 16.43 wind 5.0 43200 < th dose independent rect. 1 1
734 16.43 temperature 10.0 4320 > th dose dependent rect. 7 8
744 16.43 humidity 70.0 43200 < th dose dependent rect. 17 14
777 16.44 humidity 70.0 43200 < th dose dependent sin 12 NA
779 16.44 temperature 30.0 4320 < th dose dependent rect. 6 5
805 16.44 atmosphere 995.0 43200 < th dose dependent rect. 22 13
827 16.45 wind 5.0 43200 > th dose independent rect. 1 1
832 16.45 atmosphere 995.0 43200 > th dose independent rect. 4 6
834 16.45 atmosphere 995.0 43200 > th dose independent rect. 3 8
839 16.45 atmosphere 995.0 43200 < th dose independent rect. 2 10
855 16.45 temperature 30.0 4320 < th dose dependent sin 2 NA
860 16.45 temperature 25.0 43200 < th dose dependent rect. 8 1
861 16.45 temperature 10.0 4320 > th dose dependent rect. 7 2
864 16.45 temperature 30.0 4320 < th dose dependent rect. 13 2
894 16.45 temperature 25.0 1440 < th dose dependent rect. 1 10
940 16.45 humidity 90.0 14400 > th dose dependent rect. 8 21
943 16.46 humidity 70.0 43200 > th dose independent sin 10 NA
948 16.46 precipitation 0.1 43200 > th dose independent rect. 7 5
952 16.46 atmosphere 995.0 43200 < th dose independent rect. 3 8
968 16.46 atmosphere 995.0 43200 < th dose dependent sin 8 NA
974 16.46 temperature 30.0 1440 < th dose dependent rect. 1 3
983 16.46 temperature 10.0 1440 > th dose dependent rect. 23 5
985 16.46 precipitation 0.1 43200 > th dose dependent rect. 7 5
1000 16.46 atmosphere 995.0 43200 < th dose dependent rect. 1 9