Os10g0510500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Auxin responsive SAUR protein family protein.
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Os10g0510500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Auxin responsive SAUR protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 166.48 | 0.606 | 11 | 1.01 | 4.77 | -1.86 | -0.994 | -0.0213 | 0.277 | 10.9 | 20.16 | 95 | 17.9 | 10.8 |
| 166.31 | 0.601 | 11 | 1.02 | 4.76 | -1.86 | -1 | -- | 0.28 | 10.9 | 20.2 | 93 | 17.9 | 10.7 |
| 168.81 | 0.605 | 11 | 1.04 | 4.8 | -1.83 | -- | 0.562 | 0.274 | 10.9 | 20.17 | 93 | 18 | 10.7 |
| 170.16 | 0.608 | 11 | 0.966 | 4.81 | -1.82 | -- | -- | 0.272 | 10.9 | 20.14 | 93 | 18 | 10.7 |
| 593.01 | 1.13 | 10.9 | 2.15 | -- | -4.24 | -- | 3 | 0.502 | -- | 17.22 | 105 | 17.1 | 11.5 |
| 299.22 | 0.811 | 11 | 0.76 | 6.43 | -- | -0.469 | -- | 0.112 | 11.2 | -- | -- | -- | -- |
| 300.16 | 0.811 | 11 | 0.741 | 6.43 | -- | -- | -- | 0.11 | 11.2 | -- | -- | -- | -- |
| 273.41 | 0.77 | 11.3 | 0.521 | -- | -5.85 | -- | -- | 0.138 | -- | 13.74 | 267 | 15.7 | 11.1 |
| 194.89 | 0.65 | 11 | -- | 4.82 | -1.79 | -- | -- | 0.222 | 10.9 | 20.15 | 91 | 18 | 10.6 |
| 2883.13 | 2.51 | 11.2 | 0.583 | -- | -- | -- | -- | 0.0522 | -- | -- | -- | -- | -- |
| 314.62 | 0.83 | 11.1 | -- | 6.42 | -- | -- | -- | 0.0277 | 11.2 | -- | -- | -- | -- |
| 263.67 | 0.756 | 11.3 | -- | -- | -5.62 | -- | -- | -0.172 | -- | 13.77 | 275 | 15.4 | 11.3 |
| 2892.1 | 2.51 | 11.2 | -- | -- | -- | -- | -- | -0.0125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 170.75 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 11 |
| 2 | 179.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 11 |
| 4 | 181.27 | temperature | 15 | 90 | > th | dose dependent | rect. | 18 | 11 |
| 9 | 187.45 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 12 |
| 10 | 187.59 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 19 |
| 20 | 190.64 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 21 |
| 21 | 190.84 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 19 |
| 39 | 198.49 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 40 | 198.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 41 | 198.71 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 67 | 201.85 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 9 |
| 85 | 203.41 | temperature | 20 | 270 | > th | dose independent | rect. | 23 | 12 |
| 101 | 205.08 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 123 | 205.82 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 127 | 206.28 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 136 | 206.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 19 |
| 157 | 207.21 | temperature | 20 | 90 | > th | dose independent | rect. | 18 | 23 |
| 165 | 207.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 192 | 208.60 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 16 |
| 203 | 208.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 244 | 209.89 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 389 | 213.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 12 |
| 416 | 214.36 | temperature | 20 | 90 | > th | dose independent | rect. | 1 | 12 |
| 559 | 216.99 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 4 |
| 603 | 217.62 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 18 | 11 |
| 667 | 218.64 | temperature | 20 | 90 | > th | dose independent | rect. | 23 | 23 |
| 754 | 219.65 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 17 |
| 783 | 220.09 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 21 |
| 784 | 220.12 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 20 |
| 785 | 220.12 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 21 |
| 948 | 221.92 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |