Os10g0509600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0509600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.75 | 0.732 | 7.42 | -2.02 | 0.295 | 1.27 | -1.21 | -1.62 | 0.389 | 20.4 | 29.7 | 4865 | -- | -- |
| 241.7 | 0.724 | 7.42 | -2.33 | 0.294 | 1.15 | -1.31 | -- | 0.469 | 20.1 | 29.2 | 4819 | -- | -- |
| 245.11 | 0.729 | 7.4 | -2 | 0.336 | 1.28 | -- | -1.35 | 0.482 | 22.2 | 29.4 | 4869 | -- | -- |
| 244.85 | 0.729 | 7.43 | -2.31 | 0.326 | 1.14 | -- | -- | 0.438 | 22.4 | 29.21 | 4859 | -- | -- |
| 251.73 | 0.739 | 7.4 | -2.06 | -- | 1.22 | -- | -1.12 | 0.482 | -- | 29.4 | 4782 | -- | -- |
| 288.7 | 0.797 | 7.43 | -2.66 | 0.17 | -- | -1.52 | -- | 0.454 | 19.6 | -- | -- | -- | -- |
| 293.45 | 0.802 | 7.43 | -2.63 | 0.231 | -- | -- | -- | 0.448 | 22.8 | -- | -- | -- | -- |
| 251.12 | 0.738 | 7.42 | -2.3 | -- | 1.1 | -- | -- | 0.458 | -- | 29.12 | 4752 | -- | -- |
| 247.08 | 0.732 | 7.2 | -- | 0.277 | 2.28 | -- | -- | 1.45 | 23.2 | 20.6 | 47520 | -- | -- |
| 296.76 | 0.805 | 7.42 | -2.63 | -- | -- | -- | -- | 0.449 | -- | -- | -- | -- | -- |
| 476.01 | 1.02 | 7.36 | -- | 0.216 | -- | -- | -- | 0.741 | 21.9 | -- | -- | -- | -- |
| 251.81 | 0.739 | 7.19 | -- | -- | 2.26 | -- | -- | 1.46 | -- | 20.87 | 47520 | -- | -- |
| 478.82 | 1.02 | 7.36 | -- | -- | -- | -- | -- | 0.741 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 230.14 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 2 | 234.55 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 12 | 234.55 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 16 | 234.55 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 33 | 234.81 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 36 | 235.28 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 15 | 19 |
| 37 | 235.31 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 57 | 236.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 58 | 236.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 60 | 236.30 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 75 | 236.31 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 94 | 236.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |
| 97 | 236.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 102 | 236.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 103 | 236.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 110 | 236.97 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 111 | 236.97 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 113 | 236.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 114 | 236.99 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 117 | 237.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 119 | 237.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 125 | 237.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 126 | 237.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 142 | 237.23 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 143 | 237.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 144 | 237.25 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 147 | 237.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 17 |
| 148 | 237.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 17 |
| 149 | 237.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 6 |
| 152 | 237.36 | radiation | 40.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 155 | 237.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 157 | 237.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 161 | 237.49 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 162 | 237.49 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 163 | 237.51 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 171 | 237.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 173 | 237.72 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 21 |
| 193 | 237.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 221 | 237.93 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 233 | 238.03 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 234 | 238.04 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 256 | 238.21 | radiation | 1.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 257 | 238.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 6 |
| 261 | 238.23 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 268 | 238.29 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 269 | 238.29 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 22 | 8 |
| 271 | 238.30 | radiation | 1.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 274 | 238.33 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 306 | 238.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 4 |
| 307 | 238.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 308 | 238.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 330 | 238.62 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 4 | NA |
| 331 | 238.62 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 334 | 238.63 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 4 | NA |
| 335 | 238.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 336 | 238.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 338 | 238.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 340 | 238.66 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 341 | 238.66 | radiation | 30.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 362 | 238.82 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 371 | 238.85 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 19 | 11 |
| 397 | 238.89 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 402 | 238.92 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 414 | 238.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 426 | 239.00 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 439 | 239.05 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 465 | 239.09 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 498 | 239.21 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 530 | 239.29 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 5 |
| 533 | 239.30 | radiation | 40.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 550 | 239.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 552 | 239.34 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 557 | 239.35 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 579 | 239.41 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 585 | 239.42 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 587 | 239.43 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 636 | 239.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 662 | 239.61 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 684 | 239.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 715 | 239.72 | temperature | 25.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 717 | 239.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 719 | 239.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 743 | 239.78 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 754 | 239.79 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 789 | 239.85 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 19 |
| 790 | 239.85 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 19 |
| 802 | 239.87 | temperature | 25.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 839 | 239.91 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 23 | 17 |
| 871 | 239.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 14 |
| 898 | 239.96 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 5 |