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Os10g0509100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0277) R2 : 0.562
β1 : 0.845 (0.103) R2dD : 0.0698 R2D : -0.00285
β2 : 1.4 (0.0718) R2dC : 0.367 R2C : 0.349
β3 : -1 (0.105) R2dE : 0.0933 R2E : 0.0858
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.488 (0.0592) R2dN8 : 0.0883 R2N8 : 0.0545
σ : 0.516
deviance : 122.98
__
_____
C
peak time of C : 18.8
E
wheather : humidity
threshold : 77.28
memory length : 1338
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.9 0.521 12.5 0.848 1.4 -1.01 -0.174 0.0623 0.488 18.8 77.16 1345 -- --
122.9 0.516 12.5 0.843 1.4 -1.01 -0.178 -- 0.489 18.9 77.33 1336 -- --
122.98 0.516 12.5 0.851 1.4 -1.01 -- 0.0669 0.488 18.8 77.19 1344 -- --
122.98 0.516 12.5 0.845 1.4 -1 -- -- 0.488 18.8 77.28 1338 -- --
223.81 0.697 12.4 0.785 -- -1.12 -- -0.0256 0.495 -- 84.15 1350 -- --
147.03 0.568 12.4 0.665 1.43 -- 0.0231 -- 0.545 18.5 -- -- -- --
147.03 0.568 12.4 0.664 1.43 -- -- -- 0.545 18.5 -- -- -- --
223.8 0.697 12.4 0.791 -- -1.12 -- -- 0.495 -- 84 1350 -- --
139.73 0.551 12.5 -- 1.38 -0.931 -- -- 0.5 18.9 153.2 1309 -- --
254.12 0.745 12.4 0.629 -- -- -- -- 0.516 -- -- -- -- --
158.66 0.589 12.5 -- 1.43 -- -- -- 0.471 18.6 -- -- -- --
239.17 0.72 12.4 -- -- -1.04 -- -- 0.481 -- 130.4 1346 -- --
264.56 0.759 12.4 -- -- -- -- -- 0.446 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.54 humidity 50.0 720 > th dose dependent rect. 19 4
2 114.96 radiation 1.0 720 < th dose independent rect. 17 7
9 116.90 humidity 70.0 720 > th dose independent rect. 18 6
13 117.53 humidity 60.0 90 > th dose independent rect. 12 20
15 117.69 temperature 30.0 30 < th dose independent rect. 12 20
17 118.02 radiation 1.0 720 < th dose dependent rect. 17 7
22 118.46 temperature 10.0 720 > th dose dependent rect. 17 2
28 119.12 humidity 80.0 1440 < th dose independent rect. 7 7
31 119.18 humidity 50.0 90 > th dose dependent rect. 12 20
32 119.19 wind 7.0 720 < th dose independent rect. 17 2
33 119.32 precipitation 0.1 720 < th dose independent rect. 7 22
34 119.32 precipitation 0.1 720 < th dose dependent rect. 7 22
39 119.48 humidity 80.0 1440 > th dose independent rect. 7 7
42 119.60 precipitation 0.1 720 < th dose independent rect. 13 23
43 119.60 precipitation 0.1 720 < th dose dependent rect. 13 23
45 119.66 temperature 25.0 270 < th dose independent rect. 12 18
48 119.68 atmosphere 1000.0 30 > th dose independent rect. 12 20
61 119.96 wind 9.0 720 < th dose independent rect. 24 19
64 119.99 humidity 50.0 270 > th dose independent rect. 10 21
65 120.00 temperature 25.0 720 > th dose dependent rect. 18 1
76 120.25 precipitation 0.1 720 < th dose independent rect. 24 19
78 120.25 precipitation 0.1 720 < th dose dependent rect. 24 19
79 120.26 atmosphere 1000.0 30 > th dose independent rect. 8 4
83 120.39 wind 1.0 30 > th dose independent rect. 12 20
85 120.40 wind 7.0 720 < th dose independent rect. 17 10
98 120.53 humidity 70.0 1440 > th dose independent rect. 18 20
100 120.56 radiation 1.0 720 < th dose independent rect. 5 19
102 120.68 humidity 80.0 720 < th dose independent rect. 18 1
105 120.72 temperature 30.0 720 < th dose independent rect. 18 6
117 120.88 humidity 80.0 1440 < th dose dependent rect. 6 8
128 121.01 humidity 90.0 720 < th dose dependent rect. 18 1
147 121.17 wind 9.0 720 < th dose independent rect. 7 22
148 121.21 radiation 10.0 30 > th dose independent rect. 7 5
155 121.23 radiation 1.0 720 < th dose independent rect. 7 17
157 121.23 humidity 80.0 1440 < th dose dependent sin 5 NA
158 121.24 humidity 70.0 720 > th dose independent rect. 19 12
171 121.34 humidity 80.0 1440 < th dose dependent rect. 20 18
179 121.40 wind 9.0 720 < th dose independent rect. 13 23
195 121.49 temperature 25.0 720 > th dose dependent rect. 17 6
200 121.53 humidity 70.0 1440 < th dose independent rect. 18 20
207 121.59 temperature 10.0 30 > th dose independent rect. 8 4
210 121.59 atmosphere 1015.0 30 < th dose independent rect. 8 4
211 121.59 precipitation 0.1 30 < th dose independent rect. 8 4
212 121.59 temperature 10.0 30 > th dose independent rect. 12 20
213 121.59 precipitation 0.1 30 < th dose dependent rect. 8 4
220 121.61 temperature 10.0 1440 > th dose independent rect. 9 4
223 121.61 atmosphere 995.0 1440 > th dose independent rect. 9 4
225 121.61 temperature 10.0 1440 > th dose independent rect. 13 20
228 121.61 temperature 30.0 30 < th dose dependent rect. 13 19
234 121.64 wind 7.0 720 < th dose independent rect. 15 4
237 121.65 precipitation 0.1 720 < th dose independent rect. 15 14
238 121.65 precipitation 0.1 720 < th dose dependent rect. 15 14
244 121.66 radiation 1.0 720 > th dose independent rect. 17 19
275 121.82 radiation 1.0 720 < th dose dependent rect. 11 13
279 121.84 wind 1.0 30 > th dose independent rect. 8 4
291 121.89 wind 1.0 90 > th dose dependent rect. 12 19
292 121.90 precipitation 0.1 720 < th dose independent rect. 15 21
293 121.90 precipitation 0.1 720 < th dose dependent rect. 15 21
294 121.91 wind 9.0 30 < th dose independent rect. 8 4
295 121.91 radiation 1.0 270 > th dose independent rect. 15 21
308 121.97 humidity 50.0 1440 > th dose dependent rect. 9 5
323 122.04 temperature 25.0 720 > th dose independent rect. 17 2
339 122.10 humidity 50.0 30 > th dose independent rect. 8 4
349 122.13 atmosphere 995.0 14400 > th dose independent rect. 9 4
350 122.13 humidity 50.0 270 > th dose dependent rect. 21 10
360 122.18 precipitation 0.1 30 < th dose independent rect. 12 20
363 122.18 precipitation 0.1 30 < th dose dependent rect. 12 20
373 122.22 humidity 70.0 1440 > th dose independent rect. 24 14
381 122.23 humidity 50.0 270 > th dose dependent rect. 19 12
388 122.25 atmosphere 1000.0 270 > th dose independent rect. 8 1
415 122.34 humidity 80.0 1440 < th dose dependent rect. 20 21
416 122.35 precipitation 0.1 720 < th dose independent rect. 17 18
417 122.35 wind 9.0 30 < th dose independent rect. 12 20
418 122.35 radiation 10.0 10 > th dose independent rect. 16 20
419 122.35 precipitation 0.1 720 < th dose dependent rect. 17 18
432 122.39 humidity 50.0 720 > th dose dependent rect. 12 12
456 122.44 precipitation 0.1 720 < th dose independent rect. 17 2
458 122.44 precipitation 0.1 720 < th dose dependent rect. 17 2
461 122.45 humidity 90.0 720 < th dose dependent rect. 17 4
472 122.48 precipitation 0.1 720 < th dose independent rect. 15 4
475 122.48 precipitation 0.1 720 < th dose dependent rect. 15 4
479 122.49 wind 7.0 720 < th dose independent rect. 17 18
482 122.51 wind 1.0 720 > th dose independent rect. 17 2
483 122.51 precipitation 0.1 720 < th dose independent rect. 9 10
484 122.51 precipitation 0.1 720 < th dose dependent rect. 9 10
487 122.52 humidity 80.0 1440 > th dose independent sin 3 NA
489 122.53 precipitation 0.1 720 < th dose independent rect. 7 14
491 122.53 precipitation 0.1 720 < th dose dependent rect. 7 14
516 122.63 humidity 80.0 1440 < th dose independent sin 3 NA
520 122.65 wind 7.0 720 < th dose independent rect. 7 20
532 122.67 atmosphere 995.0 30 > th dose dependent rect. 8 4
614 122.94 temperature 30.0 720 < th dose independent rect. 12 3
636 122.99 atmosphere 995.0 270 > th dose independent rect. 10 21
639 122.99 radiation 1.0 720 < th dose dependent rect. 7 17
684 123.07 temperature 10.0 270 > th dose independent rect. 10 21
700 123.11 temperature 30.0 30 < th dose independent rect. 8 4
811 123.32 wind 1.0 270 > th dose independent rect. 3 13
814 123.33 wind 9.0 270 < th dose independent rect. 7 14
817 123.33 radiation 20.0 270 < th dose dependent rect. 19 12
818 123.33 humidity 80.0 1440 < th dose dependent rect. 16 22
874 123.47 precipitation 0.1 270 < th dose independent rect. 8 1
876 123.47 precipitation 0.1 270 < th dose dependent rect. 8 1
880 123.48 humidity 70.0 1440 > th dose independent sin 7 NA
881 123.48 wind 9.0 270 < th dose independent rect. 8 1
882 123.48 temperature 10.0 270 > th dose independent rect. 8 1
884 123.48 humidity 50.0 270 > th dose independent rect. 8 1
886 123.48 atmosphere 1015.0 270 < th dose independent rect. 8 1
888 123.48 temperature 10.0 270 > th dose independent rect. 9 23
903 123.51 precipitation 0.1 720 < th dose independent rect. 22 14
909 123.51 precipitation 0.1 720 < th dose dependent rect. 22 14
919 123.54 humidity 80.0 720 < th dose independent rect. 16 5
999 123.66 radiation 20.0 270 < th dose independent rect. 21 10
1000 123.66 humidity 50.0 1440 > th dose dependent sin 1 NA