BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0509100 Os10g0509100|AK067663
         (158 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49550.1  | chr3:18368201-18368644 FORWARD LENGTH=148          185   8e-48
AT5G24610.1  | chr5:8428577-8429017 FORWARD LENGTH=147            183   4e-47

>AT3G49550.1 | chr3:18368201-18368644 FORWARD LENGTH=148
          Length = 147

 Score =  185 bits (470), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 111/141 (78%), Gaps = 7/141 (4%)

Query: 1   MEVFGKS-VIAEPSNVIYLSSILNTEGPIPSHKCDKNCQNEHVFGNMYRCKLTGTTHICD 59
           MEVFGKS V+   +NVIYLS+IL  EGP  +HKCD  C+NE+V GNMYRCKLTG TH+CD
Sbjct: 1   MEVFGKSHVVVGSANVIYLSAILGHEGP--NHKCDWKCENENVCGNMYRCKLTGLTHVCD 58

Query: 60  KNCNQRILYDNHSSLCRVSGQLFPLSPLEQQAVRGIRRKHEVDS----NEGCSFKRRRGA 115
           KNCNQRILYDNH+SLCR SG++FPLS +E+QAV+G+RRK + +S    +E C  +RRR A
Sbjct: 59  KNCNQRILYDNHNSLCRASGRIFPLSLVEEQAVKGVRRKLDDESQQQPSESCVKRRRRDA 118

Query: 116 QLHPSPFERSYTAVSPIPSQP 136
           Q H SPFERS+ AVSP  SQ 
Sbjct: 119 QFHSSPFERSFAAVSPFCSQA 139



>AT5G24610.1 | chr5:8428577-8429017 FORWARD LENGTH=147
          Length = 146

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 93/139 (66%), Positives = 109/139 (78%), Gaps = 7/139 (5%)

Query: 1   MEVFGKS-VIAEPSNVIYLSSILNTEGPIPSHKCDKNCQNEHVFGNMYRCKLTGTTHICD 59
           MEVFGKS ++   +NVIYLS+IL  +     HKCD  C+NE+V GNMYRCKLTG TH+CD
Sbjct: 1   MEVFGKSPMVVTSANVIYLSAILGRD--CDGHKCDWKCENENVCGNMYRCKLTGLTHVCD 58

Query: 60  KNCNQRILYDNHSSLCRVSGQLFPLSPLEQQAVRGIRRK---HEVDSNEGCSFK-RRRGA 115
           KNCNQRILYDNHSSLCR SG++FPLS +E+QAV+G+RRK    E   +E CSFK RRR A
Sbjct: 59  KNCNQRILYDNHSSLCRASGRIFPLSSVEEQAVKGVRRKLDAAESHPSESCSFKRRRRDA 118

Query: 116 QLHPSPFERSYTAVSPIPS 134
           Q H SPFERS+TAVSPI S
Sbjct: 119 QFHASPFERSFTAVSPICS 137



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,585,812
Number of extensions: 149983
Number of successful extensions: 325
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 318
Number of HSP's successfully gapped: 2
Length of query: 158
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 68
Effective length of database: 8,639,129
Effective search space: 587460772
Effective search space used: 587460772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 107 (45.8 bits)