Os10g0508700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os10g0508700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 382.57 | 0.919 | 4.05 | -1.98 | 2.44 | -3.9 | -8.99 | 17.7 | -0.329 | 18.6 | 25.1 | 789 | 0.259 | -- |
| 547.22 | 1.09 | 4.25 | -3 | 2.2 | -2.9 | -5.53 | -- | -0.674 | 17.7 | 19.91 | 1019 | 0.0158 | -- |
| 569.03 | 1.11 | 4.15 | -2.29 | 2.33 | -4.27 | -- | 18.1 | -0.767 | 18.7 | 26.78 | 800 | 1.49 | -- |
| 575.26 | 1.12 | 4.33 | -4.57 | 2.14 | -2.67 | -- | -- | -0.851 | 18.8 | 23.38 | 886 | 0.000473 | -- |
| 686.2 | 1.22 | 4.07 | -1.77 | -- | -3.3 | -- | 16.5 | -0.889 | -- | 26 | 1854 | 3.64 | -- |
| 579.4 | 1.13 | 4.45 | -5.45 | 1.12 | -- | -7.65 | -- | -1.41 | 18.8 | -- | -- | -- | -- |
| 727.49 | 1.26 | 4.46 | -5.33 | 1.1 | -- | -- | -- | -1.44 | 19.4 | -- | -- | -- | -- |
| 582.49 | 1.12 | 4.12 | -2.15 | -- | -4.25 | -- | -- | -0.0615 | -- | -89.49 | 31104 | 5.24 | -- |
| 1070.14 | 1.52 | 4.14 | -- | 2.05 | -4.05 | -- | -- | -0.0629 | 18.5 | 19.4 | 1067 | 4.32e-07 | -- |
| 791.66 | 1.31 | 4.43 | -5.35 | -- | -- | -- | -- | -1.46 | -- | -- | -- | -- | -- |
| 1475.86 | 1.8 | 4.33 | -- | 1.15 | -- | -- | -- | -0.845 | 19.1 | -- | -- | -- | -- |
| 634.51 | 1.17 | 3.98 | -- | -- | -5.62 | -- | -- | 0.592 | -- | -33.89 | 35450 | 5.56 | -- |
| 1545.6 | 1.84 | 4.3 | -- | -- | -- | -- | -- | -0.863 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 380.21 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 2 | 381.10 | temperature | 25 | 720 | > th | dose dependent | rect. | 2 | 12 |
| 10 | 384.17 | temperature | 25 | 720 | > th | dose dependent | rect. | 22 | 16 |
| 14 | 385.51 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 15 | 385.95 | temperature | 20 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 18 | 386.09 | temperature | 20 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 19 | 386.21 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 6 |
| 28 | 387.66 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 29 | 387.93 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 36 | 389.01 | temperature | 25 | 720 | > th | dose dependent | sin | 5 | NA |
| 41 | 389.70 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 13 |
| 43 | 390.10 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 46 | 390.46 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 49 | 391.11 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 5 |
| 57 | 392.28 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 66 | 392.77 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 92 | 394.79 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 100 | 395.25 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 6 |
| 128 | 396.22 | wind | 1 | 43200 | < th | dose dependent | sin | 13 | NA |
| 131 | 396.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 167 | 397.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 178 | 397.71 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 181 | 397.80 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 184 | 397.83 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 190 | 397.89 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 204 | 398.44 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 215 | 398.76 | radiation | 10 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 227 | 399.03 | radiation | 10 | 43200 | < th | dose independent | rect. | 17 | 14 |
| 267 | 400.03 | temperature | 20 | 14400 | < th | dose dependent | sin | 11 | NA |
| 279 | 400.29 | radiation | 1 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 290 | 400.29 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 16 |
| 388 | 401.65 | radiation | 10 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 389 | 401.65 | radiation | 10 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 390 | 401.66 | radiation | 10 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 575 | 403.77 | radiation | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 669 | 404.40 | temperature | 20 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 674 | 404.42 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 697 | 404.56 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 809 | 406.49 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 817 | 406.69 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 847 | 407.14 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 13 |
| 886 | 407.59 | radiation | 40 | 43200 | < th | dose dependent | rect. | 17 | 14 |
| 888 | 407.70 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 911 | 408.08 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 992 | 408.63 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 6 |
| 996 | 408.76 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 17 |
| 998 | 408.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 10 | 1 |