Os10g0505500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Nonspecific lipid-transfer protein 2G (LTP2G) (Lipid transfer protein 2 isoform 1) (LTP2-1) (7 kDa lipid transfer protein 1).
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Os10g0505500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Nonspecific lipid-transfer protein 2G (LTP2G) (Lipid transfer protein 2 isoform 1) (LTP2-1) (7 kDa lipid transfer protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.13 | 0.29 | 2.89 | -0.16 | 0.0429 | -0.239 | -0.05 | 0.99 | -0.00283 | 14.4 | 1 | 15 | -- | -- |
| 38.98 | 0.291 | 2.89 | -0.122 | 0.0345 | -0.173 | 0.0288 | -- | 0.00438 | 14.2 | 1.069 | 14 | -- | -- |
| 38.14 | 0.288 | 2.89 | -0.161 | 0.0427 | -0.239 | -- | 0.967 | -0.00297 | 14.3 | 1.008 | 14 | -- | -- |
| 38.97 | 0.291 | 2.88 | -0.122 | 0.0322 | -0.212 | -- | -- | 0.0102 | 13.9 | 0.8403 | 14 | -- | -- |
| 38.23 | 0.288 | 2.89 | -0.159 | -- | -0.216 | -- | 0.954 | -0.00387 | -- | 1.017 | 14 | -- | -- |
| 39.61 | 0.295 | 2.88 | -0.103 | 0.0332 | -- | -0.0083 | -- | 0.00533 | 7.68 | -- | -- | -- | -- |
| 39.61 | 0.295 | 2.88 | -0.103 | 0.0332 | -- | -- | -- | 0.00535 | 7.74 | -- | -- | -- | -- |
| 39.03 | 0.291 | 2.88 | -0.121 | -- | -0.194 | -- | -- | 0.00778 | -- | 0.8624 | 14 | -- | -- |
| 39.28 | 0.292 | 2.88 | -- | 0.0343 | -0.183 | -- | -- | 0.0209 | 13.3 | 0.8157 | 8 | -- | -- |
| 39.67 | 0.294 | 2.88 | -0.103 | -- | -- | -- | -- | 0.00583 | -- | -- | -- | -- | -- |
| 39.89 | 0.295 | 2.88 | -- | 0.0325 | -- | -- | -- | 0.0169 | 7.96 | -- | -- | -- | -- |
| 39.35 | 0.292 | 2.88 | -- | -- | -0.172 | -- | -- | 0.0205 | -- | 0.8709 | 8 | -- | -- |
| 39.95 | 0.295 | 2.88 | -- | -- | -- | -- | -- | 0.0172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.56 | radiation | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 2 | 29.56 | radiation | 1 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 76 | 34.43 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 17 | 2 |
| 77 | 34.43 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 3 |
| 83 | 34.43 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 84 | 34.43 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 3 |
| 90 | 34.44 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 103 | 34.44 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 117 | 34.46 | humidity | 90 | 270 | > th | dose independent | rect. | 12 | 1 |
| 119 | 34.46 | humidity | 90 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 152 | 34.88 | wind | 7 | 90 | > th | dose independent | rect. | 14 | 1 |
| 226 | 35.37 | humidity | 80 | 90 | > th | dose independent | rect. | 15 | 1 |
| 227 | 35.37 | wind | 7 | 90 | > th | dose dependent | rect. | 14 | 1 |
| 240 | 35.52 | humidity | 80 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 260 | 35.76 | temperature | 25 | 90 | < th | dose independent | rect. | 14 | 1 |
| 327 | 36.34 | humidity | 80 | 10 | > th | dose independent | rect. | 15 | 1 |
| 374 | 36.60 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 400 | 36.60 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 427 | 36.61 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 428 | 36.61 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 444 | 36.62 | wind | 7 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 447 | 36.63 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 530 | 36.63 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 532 | 36.63 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 658 | 36.65 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 662 | 36.65 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 4 |
| 698 | 36.69 | humidity | 60 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 733 | 36.73 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 737 | 36.73 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 853 | 36.76 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |