Os10g0499600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0499600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 298.11 | 0.811 | 7.54 | -2.56 | 1.34 | -1.48 | 2.72 | 1.29 | -0.394 | 20.7 | 86.74 | 9 | -- | -- |
| 300.22 | 0.807 | 7.54 | -2.59 | 1.35 | -1.56 | 2.46 | -- | -0.385 | 20.5 | 88.62 | 5 | -- | -- |
| 319.37 | 0.832 | 7.53 | -2.72 | 1.37 | -1.38 | -- | 0.569 | -0.384 | 20.9 | 91 | 5 | -- | -- |
| 318.65 | 0.831 | 7.53 | -2.69 | 1.36 | -1.42 | -- | -- | -0.358 | 20.9 | 91 | 5 | -- | -- |
| 417.98 | 0.957 | 7.51 | -2.65 | -- | -1.85 | -- | 0.324 | -0.417 | -- | 86.32 | 4 | -- | -- |
| 331.94 | 0.854 | 7.54 | -2.64 | 1.63 | -- | 1.78 | -- | -0.363 | 22.4 | -- | -- | -- | -- |
| 344.36 | 0.869 | 7.54 | -2.71 | 1.62 | -- | -- | -- | -0.37 | 22.6 | -- | -- | -- | -- |
| 418.08 | 0.952 | 7.51 | -2.65 | -- | -1.81 | -- | -- | -0.425 | -- | 86 | 2 | -- | -- |
| 504.8 | 1.05 | 7.48 | -- | 1.33 | -1.59 | -- | -- | -0.119 | 20.5 | 85.36 | 5 | -- | -- |
| 506.13 | 1.05 | 7.5 | -2.68 | -- | -- | -- | -- | -0.362 | -- | -- | -- | -- | -- |
| 537.99 | 1.08 | 7.47 | -- | 1.6 | -- | -- | -- | -0.0678 | 22.5 | -- | -- | -- | -- |
| 602.48 | 1.15 | 7.45 | -- | -- | -1.91 | -- | -- | -0.14 | -- | 85 | 2 | -- | -- |
| 695.68 | 1.23 | 7.43 | -- | -- | -- | -- | -- | -0.0645 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.34 | humidity | 80 | 10 | > th | dose independent | rect. | 7 | 8 |
| 3 | 293.42 | humidity | 90 | 30 | < th | dose dependent | rect. | 24 | 18 |
| 9 | 293.89 | humidity | 90 | 30 | < th | dose dependent | rect. | 6 | 12 |
| 17 | 294.39 | humidity | 90 | 30 | < th | dose dependent | rect. | 22 | 20 |
| 18 | 294.52 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 22 |
| 19 | 294.71 | humidity | 90 | 10 | < th | dose dependent | sin | 23 | NA |
| 28 | 295.25 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 30 | 295.28 | humidity | 50 | 10 | > th | dose dependent | rect. | 16 | 23 |
| 38 | 295.56 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 58 | 296.16 | humidity | 50 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 66 | 296.34 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 76 | 296.44 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 7 |
| 89 | 296.71 | humidity | 90 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 120 | 297.28 | humidity | 90 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 125 | 297.35 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 138 | 297.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 148 | 297.67 | humidity | 90 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 165 | 297.86 | humidity | 80 | 270 | < th | dose independent | rect. | 7 | 8 |
| 193 | 298.08 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 206 | 298.18 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 8 |
| 207 | 298.20 | humidity | 60 | 10 | > th | dose dependent | rect. | 18 | 20 |
| 214 | 298.26 | humidity | 90 | 30 | < th | dose dependent | rect. | 9 | 9 |
| 221 | 298.34 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 15 |
| 223 | 298.35 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 253 | 298.56 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 255 | 298.57 | humidity | 90 | 10 | < th | dose dependent | no | NA | NA |
| 262 | 298.59 | humidity | 90 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 290 | 298.81 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 326 | 298.98 | humidity | 90 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 330 | 299.05 | humidity | 90 | 270 | < th | dose dependent | sin | 3 | NA |
| 360 | 299.18 | humidity | 80 | 10 | < th | dose independent | rect. | 23 | 17 |
| 371 | 299.21 | humidity | 80 | 10 | < th | dose independent | rect. | 2 | 14 |
| 451 | 299.59 | humidity | 90 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 505 | 299.89 | humidity | 50 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 511 | 299.94 | humidity | 50 | 10 | > th | dose dependent | no | NA | NA |
| 513 | 299.94 | humidity | 50 | 10 | > th | dose dependent | rect. | 18 | 18 |
| 514 | 299.94 | humidity | 50 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 540 | 300.08 | humidity | 50 | 10 | > th | dose dependent | rect. | 16 | 20 |
| 593 | 300.37 | humidity | 70 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 615 | 300.44 | radiation | 10 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 657 | 300.58 | humidity | 80 | 270 | < th | dose independent | sin | 4 | NA |
| 769 | 300.88 | humidity | 80 | 30 | < th | dose independent | rect. | 9 | 7 |
| 789 | 300.95 | humidity | 80 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 881 | 301.25 | humidity | 80 | 10 | < th | dose dependent | rect. | 9 | 17 |
| 891 | 301.29 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 4 |
| 897 | 301.34 | humidity | 80 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 942 | 301.51 | humidity | 80 | 270 | > th | dose independent | sin | 4 | NA |
| 960 | 301.65 | humidity | 80 | 30 | < th | dose independent | rect. | 9 | 9 |