Os10g0493800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0493800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.8 | 0.414 | 7.8 | -0.678 | 0.775 | 1.39 | 0.975 | 1.41 | -0.0723 | 2.66 | 10.54 | 8 | -- | -- |
| 78.82 | 0.417 | 7.82 | -0.873 | 0.764 | 1.39 | 0.579 | -- | -0.123 | 2.73 | 10.54 | 8 | -- | -- |
| 79.83 | 0.419 | 7.82 | -0.835 | 0.76 | 1.35 | -- | 0.339 | -0.109 | 2.88 | 10.54 | 8 | -- | -- |
| 79.93 | 0.419 | 7.82 | -0.881 | 0.759 | 1.36 | -- | -- | -0.122 | 2.87 | 10.54 | 8 | -- | -- |
| 91.01 | 0.444 | 7.83 | -0.996 | -- | 0.817 | -- | -0.196 | -0.103 | -- | 10.3 | 2491 | -- | -- |
| 97.04 | 0.462 | 7.78 | -0.615 | 0.378 | -- | 0.321 | -- | 0.0689 | 3.11 | -- | -- | -- | -- |
| 97.31 | 0.462 | 7.78 | -0.622 | 0.384 | -- | -- | -- | 0.0667 | 3.46 | -- | -- | -- | -- |
| 90.63 | 0.443 | 7.82 | -0.939 | -- | 0.854 | -- | -- | -0.0994 | -- | 8.691 | 2502 | -- | -- |
| 98.48 | 0.465 | 7.79 | -- | 0.624 | 0.931 | -- | -- | 0.0265 | 2.98 | 14.49 | 9 | -- | -- |
| 105.58 | 0.48 | 7.78 | -0.605 | -- | -- | -- | -- | 0.0769 | -- | -- | -- | -- | -- |
| 107.49 | 0.485 | 7.76 | -- | 0.372 | -- | -- | -- | 0.136 | 3.47 | -- | -- | -- | -- |
| 108.35 | 0.485 | 7.78 | -- | -- | 0.439 | -- | -- | 0.0645 | -- | 21.28 | 2464 | -- | -- |
| 115.24 | 0.501 | 7.77 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 52 | 73.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 55 | 73.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 71 | 74.38 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 88 | 75.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 92 | 75.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 97 | 75.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 177 | 76.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 187 | 76.83 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 252 | 77.50 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 280 | 77.67 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 303 | 77.84 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 308 | 77.88 | temperature | 20 | 10 | > th | dose independent | rect. | 19 | 10 |
| 322 | 77.95 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 372 | 78.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 385 | 78.28 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 393 | 78.31 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 398 | 78.33 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 414 | 78.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 430 | 78.50 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 441 | 78.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 473 | 78.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 495 | 78.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 499 | 78.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 505 | 78.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 510 | 78.85 | temperature | 25 | 270 | < th | dose independent | rect. | 12 | 21 |
| 514 | 78.86 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 538 | 78.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 542 | 78.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 606 | 79.10 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 657 | 79.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 666 | 79.22 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 680 | 79.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 710 | 79.34 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 776 | 79.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 782 | 79.49 | temperature | 15 | 10 | > th | dose dependent | rect. | 19 | 10 |
| 824 | 79.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 870 | 79.65 | temperature | 25 | 4320 | < th | dose independent | sin | 13 | NA |
| 878 | 79.66 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 8 |
| 888 | 79.68 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 947 | 79.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |