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Os10g0492300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15 (0.0261) R2 : 0.741
β1 : -2.36 (0.0957) R2dD : 0.344 R2D : 0.219
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.01 (0.0741) R2dE : 0.45 R2E : 0.366
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.609 (0.0558) R2dN8 : 0.0914 R2N8 : -0.00503
σ : 0.488
deviance : 109.67
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_____
C
peak time of C : --
E
wheather : temperature
threshold : 3.329
memory length : 309
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 20.5
open length of G : 15.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.42 0.411 15 -2.24 1.06 1.55 1.89 1.8 -0.639 8.97 9.041 328 17.6 18
79.15 0.414 15 -2.4 1.08 1.54 2.29 -- -0.678 9.01 8.747 345 17.6 17.7
86.4 0.433 15 -2.13 1.03 1.56 -- 3.18 -0.608 8.74 8.652 324 17.8 18
97.32 0.459 15 -2.36 1.04 1.57 -- -- -0.708 9.13 9.133 343 17.6 17.7
100.61 0.467 15 -2.03 -- 2.24 -- 4.15 -0.566 -- -0.6776 402 18.7 17.1
113.84 0.5 14.9 -2.21 1.74 -- 2.68 -- -0.541 7.68 -- -- -- --
134.02 0.542 14.9 -2.15 1.75 -- -- -- -0.546 7.58 -- -- -- --
109.67 0.488 15 -2.36 -- 2.01 -- -- -0.609 -- 3.329 309 20.5 15.3
237.28 0.717 14.9 -- 1.15 1.24 -- -- -0.397 8.39 6.778 267 18.1 18.5
298.09 0.807 15 -2.12 -- -- -- -- -0.519 -- -- -- -- --
255.29 0.747 14.9 -- 1.73 -- -- -- -0.307 7.67 -- -- -- --
243.85 0.727 14.9 -- -- 1.73 -- -- -0.281 -- -11.95 319 21.1 14.6
416.64 0.953 14.9 -- -- -- -- -- -0.284 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.21 temperature 10.0 270 > th dose dependent rect. 18 18
2 79.33 temperature 10.0 270 > th dose dependent rect. 19 16
3 79.51 temperature 15.0 270 > th dose dependent rect. 18 7
21 82.74 temperature 20.0 270 > th dose independent rect. 18 18
24 83.11 temperature 15.0 10 > th dose dependent rect. 21 17
33 83.80 atmosphere 1000.0 10 > th dose independent rect. 14 18
36 84.00 temperature 30.0 270 < th dose dependent rect. 23 8
46 84.56 atmosphere 995.0 10 > th dose dependent rect. 14 18
50 84.85 atmosphere 1000.0 270 > th dose independent rect. 13 17
55 85.12 temperature 20.0 90 > th dose independent rect. 21 17
76 86.16 atmosphere 995.0 270 > th dose dependent rect. 13 17
80 86.30 atmosphere 1015.0 270 < th dose dependent rect. 18 7
106 86.87 temperature 20.0 270 > th dose independent rect. 18 7
116 87.28 temperature 20.0 270 > th dose independent rect. 5 8
120 87.30 atmosphere 995.0 270 > th dose dependent rect. 12 8
130 87.46 atmosphere 995.0 10 > th dose dependent rect. 16 16
150 87.75 temperature 20.0 270 > th dose independent rect. 6 19
170 87.98 atmosphere 1015.0 270 < th dose independent rect. 17 8
239 89.11 atmosphere 1015.0 270 < th dose independent rect. 18 18
258 89.28 atmosphere 1000.0 270 > th dose independent rect. 12 6
271 89.39 atmosphere 995.0 270 > th dose independent rect. 1 16
335 90.24 wind 9.0 270 < th dose independent rect. 13 17
346 90.31 radiation 1.0 270 > th dose independent rect. 18 19
363 90.46 precipitation 0.1 270 < th dose independent rect. 6 7
364 90.46 precipitation 0.1 270 < th dose dependent rect. 6 7
366 90.49 atmosphere 995.0 270 > th dose independent rect. 6 7
367 90.49 atmosphere 1015.0 270 < th dose independent rect. 6 7
368 90.49 temperature 10.0 270 > th dose independent rect. 13 17
386 90.58 wind 9.0 270 < th dose independent rect. 1 16
392 90.64 humidity 50.0 270 > th dose independent rect. 6 7
394 90.66 radiation 1.0 270 > th dose independent rect. 6 7
396 90.67 temperature 20.0 270 > th dose dependent rect. 21 1
415 90.75 wind 9.0 270 < th dose independent rect. 6 7
426 90.81 precipitation 0.1 270 < th dose independent rect. 17 8
428 90.81 precipitation 0.1 270 < th dose dependent rect. 17 8
441 90.90 wind 7.0 270 < th dose independent rect. 12 6
445 90.93 wind 7.0 270 < th dose independent rect. 13 4
452 90.96 precipitation 0.1 270 < th dose independent rect. 17 20
455 90.96 precipitation 0.1 270 < th dose dependent rect. 17 20
465 91.03 atmosphere 1015.0 270 < th dose independent rect. 8 15
473 91.13 wind 1.0 270 > th dose independent rect. 6 7
477 91.17 temperature 10.0 270 > th dose independent rect. 17 8
478 91.17 radiation 20.0 270 < th dose independent rect. 17 8
481 91.17 temperature 10.0 270 > th dose independent rect. 1 16
482 91.17 atmosphere 1015.0 270 < th dose independent rect. 1 16
486 91.19 atmosphere 995.0 10 > th dose dependent rect. 14 7
489 91.21 wind 9.0 270 < th dose independent rect. 17 8
491 91.22 humidity 50.0 270 > th dose independent rect. 17 8
512 91.41 radiation 40.0 270 < th dose dependent rect. 17 8
522 91.50 radiation 1.0 270 > th dose independent rect. 13 4
533 91.56 precipitation 0.1 270 < th dose independent rect. 18 18
536 91.56 precipitation 0.1 270 < th dose dependent rect. 18 18
543 91.63 precipitation 0.1 270 < th dose independent rect. 1 16
546 91.63 precipitation 0.1 270 < th dose dependent rect. 1 16
557 91.71 precipitation 0.1 270 < th dose independent rect. 13 4
559 91.71 precipitation 0.1 270 < th dose dependent rect. 13 4
576 91.81 temperature 15.0 10 > th dose dependent rect. 21 6
589 91.87 atmosphere 1015.0 10 < th dose dependent rect. 19 8
592 91.88 atmosphere 1015.0 10 < th dose dependent rect. 19 6
594 91.89 temperature 10.0 270 > th dose independent rect. 13 4
596 91.89 atmosphere 1010.0 270 < th dose independent rect. 13 4
599 91.89 temperature 10.0 270 > th dose independent rect. 17 20
626 92.06 atmosphere 1000.0 10 > th dose independent rect. 14 7
631 92.08 humidity 50.0 270 > th dose independent rect. 17 20
639 92.10 atmosphere 1015.0 10 < th dose independent rect. 21 17
641 92.11 humidity 50.0 270 > th dose independent rect. 18 18
647 92.14 atmosphere 1010.0 270 < th dose independent rect. 12 6
657 92.16 wind 9.0 270 < th dose independent rect. 17 20
661 92.19 precipitation 0.1 270 < th dose independent rect. 12 6
662 92.19 precipitation 0.1 270 < th dose dependent rect. 12 6
676 92.25 wind 1.0 270 > th dose independent rect. 17 8
677 92.25 precipitation 0.1 270 < th dose independent rect. 13 17
678 92.25 precipitation 0.1 270 < th dose dependent rect. 13 17
694 92.30 temperature 10.0 270 > th dose independent rect. 12 6
699 92.30 temperature 10.0 270 > th dose independent rect. 18 18
705 92.32 temperature 25.0 270 < th dose independent rect. 23 9
717 92.36 wind 9.0 270 < th dose independent rect. 18 18
720 92.37 temperature 20.0 90 > th dose dependent sin 8 NA
766 92.55 temperature 20.0 10 > th dose independent rect. 8 6
773 92.57 temperature 10.0 270 > th dose dependent rect. 6 6
779 92.59 wind 1.0 270 > th dose independent rect. 13 4
780 92.60 humidity 90.0 270 < th dose independent rect. 13 4
800 92.68 wind 9.0 10 < th dose independent rect. 14 18
830 92.82 atmosphere 1015.0 90 < th dose dependent rect. 9 16
834 92.84 radiation 40.0 10 < th dose independent rect. 14 18
885 92.98 temperature 15.0 10 > th dose independent rect. 14 18
891 93.00 wind 1.0 270 > th dose independent rect. 12 6
892 93.00 temperature 10.0 10 > th dose independent rect. 8 6
894 93.00 atmosphere 995.0 10 > th dose independent rect. 8 6
895 93.00 atmosphere 1015.0 10 < th dose independent rect. 8 6
896 93.00 precipitation 0.1 10 < th dose independent rect. 8 6
899 93.00 precipitation 0.1 10 < th dose dependent rect. 8 6
900 93.00 temperature 30.0 90 < th dose dependent rect. 3 7
915 93.06 atmosphere 995.0 270 > th dose independent rect. 18 18
941 93.13 radiation 1.0 10 > th dose independent rect. 8 6
952 93.17 temperature 20.0 90 > th dose independent rect. 21 4
968 93.23 wind 9.0 10 < th dose independent rect. 8 6