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Os10g0485300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.018) R2 : 0.667
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.4 (0.0464) R2dC : 0.667 R2C : 0.663
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.083 (0.0379) R2dN8 : 0.00453 R2N8 : -2.07e-05
σ : 0.339
deviance : 52.66
__
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C
peak time of C : 4.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
39.48 0.295 12.3 0.398 1.15 0.888 -0.325 -1.18 0.141 4.74 29.9 91 -- --
41.08 0.299 12.4 0.245 1.13 0.976 -0.718 -- 0.137 4.75 29.5 101 -- --
39.71 0.293 12.3 0.431 1.16 0.87 -- -1.37 0.145 4.75 29.9 94 -- --
42.13 0.302 12.4 0.202 1.14 0.881 -- -- 0.088 4.72 29.49 112 -- --
89.56 0.441 12.3 0.704 -- 2.17 -- -1.71 0.298 -- 37.7 151 -- --
51.75 0.337 12.4 -0.0234 1.4 -- -0.573 -- -0.0882 4.38 -- -- -- --
52.65 0.34 12.4 -0.0185 1.4 -- -- -- -0.0851 4.4 -- -- -- --
91.82 0.446 12.4 0.455 -- 2.14 -- -- 0.232 -- 61.87 148 -- --
43.08 0.306 12.4 -- 1.16 0.831 -- -- 0.075 4.69 29.5 98 -- --
157.92 0.587 12.4 0.0367 -- -- -- -- -0.048 -- -- -- -- --
52.66 0.339 12.4 -- 1.4 -- -- -- -0.083 4.4 -- -- -- --
96.66 0.458 12.4 -- -- 1.77 -- -- 0.198 -- 31.11 140 -- --
157.96 0.587 12.4 -- -- -- -- -- -0.0521 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.74 temperature 15 90 > th dose dependent rect. 19 23
2 37.79 temperature 15 90 > th dose dependent rect. 5 23
12 38.68 temperature 15 10 > th dose dependent rect. 6 22
16 38.88 temperature 30 270 < th dose dependent rect. 23 22
17 38.90 wind 1 43200 > th dose dependent rect. 24 2
20 38.90 temperature 30 90 < th dose dependent rect. 13 23
39 39.20 wind 1 43200 > th dose dependent rect. 23 4
52 39.31 wind 3 43200 > th dose independent rect. 24 2
63 39.39 wind 9 43200 < th dose dependent rect. 1 1
67 39.40 temperature 15 10 > th dose dependent rect. 21 21
69 39.42 wind 3 43200 < th dose independent rect. 24 2
76 39.49 temperature 30 90 < th dose dependent no NA NA
79 39.52 wind 9 43200 < th dose dependent rect. 23 4
82 39.53 temperature 20 270 > th dose independent rect. 19 21
93 39.57 temperature 30 90 < th dose dependent rect. 3 20
100 39.61 temperature 30 30 < th dose dependent rect. 11 23
103 39.64 temperature 30 90 < th dose dependent rect. 17 23
108 39.68 temperature 20 270 > th dose independent rect. 20 19
117 39.73 temperature 15 90 > th dose dependent no NA NA
120 39.74 temperature 30 30 < th dose dependent rect. 9 23
124 39.76 radiation 10 4320 > th dose independent rect. 5 2
137 39.78 temperature 15 10 > th dose dependent no NA NA
138 39.78 temperature 30 90 < th dose dependent rect. 3 17
158 39.84 radiation 10 4320 > th dose dependent rect. 6 1
186 39.95 temperature 30 10 < th dose dependent rect. 2 22
221 40.13 temperature 30 90 < th dose dependent rect. 7 23
235 40.19 temperature 30 10 < th dose dependent rect. 7 23
250 40.24 temperature 30 10 < th dose dependent rect. 4 17
254 40.27 temperature 20 4320 > th dose independent rect. 18 1
274 40.34 humidity 50 43200 < th dose independent rect. 8 1
289 40.40 temperature 20 4320 > th dose independent rect. 17 6
292 40.41 temperature 20 4320 < th dose independent rect. 18 1
296 40.44 temperature 20 4320 < th dose independent rect. 17 6
311 40.48 temperature 30 10 < th dose dependent rect. 23 23
312 40.49 temperature 20 4320 > th dose independent rect. 18 3
317 40.50 temperature 20 4320 < th dose independent rect. 18 3
320 40.51 temperature 20 1440 > th dose independent rect. 6 1
333 40.54 humidity 50 43200 > th dose independent rect. 7 2
340 40.56 temperature 30 90 < th dose dependent rect. 17 19
359 40.61 temperature 15 10 > th dose dependent rect. 23 19
366 40.62 temperature 20 270 > th dose independent rect. 4 22
379 40.67 temperature 20 1440 < th dose independent rect. 5 2
402 40.72 temperature 20 4320 < th dose dependent rect. 20 4
408 40.74 humidity 50 43200 < th dose independent rect. 20 13
409 40.74 temperature 20 1440 > th dose independent rect. 21 18
429 40.77 temperature 20 1440 < th dose independent rect. 22 17
430 40.77 temperature 20 720 > th dose independent rect. 4 20
438 40.78 temperature 20 1440 > th dose independent rect. 21 15
445 40.79 temperature 20 1440 < th dose independent rect. 22 14
497 40.85 temperature 20 1440 > th dose independent rect. 5 3
500 40.85 humidity 50 43200 > th dose independent rect. 21 12
537 40.91 temperature 20 4320 < th dose independent rect. 9 15
555 40.93 temperature 20 1440 < th dose independent sin 5 NA
594 40.96 temperature 20 1440 > th dose independent rect. 22 1
604 40.96 temperature 30 10 < th dose dependent rect. 19 23
605 40.97 temperature 20 1440 > th dose independent sin 5 NA
622 40.98 temperature 20 10 > th dose independent rect. 21 21
642 40.99 temperature 15 10 > th dose dependent rect. 23 23
648 41.00 temperature 20 1440 > th dose independent rect. 17 19
649 41.00 wind 1 43200 > th dose dependent rect. 5 1
650 41.00 humidity 50 43200 < th dose dependent rect. 8 1
667 41.02 humidity 50 43200 > th dose independent rect. 24 9
684 41.03 temperature 20 1440 < th dose independent rect. 17 19
704 41.04 temperature 20 1440 > th dose independent rect. 9 23
707 41.04 humidity 60 43200 < th dose dependent rect. 20 13
754 41.07 wind 9 43200 < th dose dependent rect. 5 1
756 41.07 wind 7 14400 > th dose dependent rect. 5 7
764 41.08 humidity 50 43200 > th dose independent rect. 21 6
772 41.08 temperature 20 1440 < th dose independent rect. 9 23
792 41.09 temperature 15 270 > th dose dependent rect. 5 10
803 41.10 temperature 20 1440 < th dose independent rect. 5 23
805 41.10 wind 7 14400 > th dose dependent rect. 7 5
806 41.10 wind 7 14400 > th dose dependent rect. 22 15
808 41.11 temperature 20 4320 > th dose independent sin 19 NA
824 41.12 temperature 20 1440 > th dose independent no NA NA
881 41.15 temperature 20 1440 < th dose independent no NA NA
913 41.17 temperature 20 4320 < th dose independent sin 19 NA
957 41.19 temperature 20 1440 < th dose independent rect. 3 23
980 41.21 wind 3 43200 < th dose independent rect. 23 14
993 41.21 wind 7 14400 > th dose dependent rect. 4 9