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Os10g0483900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.99 (0.0292) R2 : 0.179
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.1 (0.111) R2dE : 0.188 R2E : 0.144
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.237 (0.063) R2dN8 : 0.0351 R2N8 : -0.009
σ : 0.544
deviance : 136.33
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C
peak time of C : --
E
wheather : precipitation
threshold : 0.5669
memory length : 19416
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.4 0.52 9.96 -0.276 0.33 1.05 -1.43 3.81 0.199 18.5 0.2041 4847 -- --
130.19 0.531 10 -0.163 0.314 1.22 -1.55 -- 0.166 18.4 0.6301 2328 -- --
127.18 0.525 9.96 -0.241 0.347 1.02 -- 3.99 0.19 18.9 0.2875 4839 -- --
122.68 0.516 10 -0.702 0.317 1.36 -- -- 0.138 21 1 28523 -- --
132.95 0.537 9.95 -0.265 -- 1.07 -- 3.89 0.187 -- 0.2913 4839 -- --
153.8 0.581 10 0.127 0.312 -- -1.63 -- 0.107 18.3 -- -- -- --
159.02 0.591 10 0.141 0.335 -- -- -- 0.0987 20 -- -- -- --
127.81 0.527 10 -0.753 -- 1.42 -- -- 0.206 -- 0.9914 29658 -- --
130.56 0.532 10 -- 0.282 1.16 -- -- 0.255 19.6 0.6115 19397 -- --
165.14 0.6 10 0.138 -- -- -- -- 0.0944 -- -- -- -- --
159.54 0.591 10 -- 0.334 -- -- -- 0.083 20 -- -- -- --
136.33 0.544 9.99 -- -- 1.1 -- -- 0.237 -- 0.5669 19416 -- --
165.64 0.601 10 -- -- -- -- -- 0.0791 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.00 precipitation 0.1 14400 > th dose dependent rect. 13 3
2 114.08 wind 3.0 43200 < th dose independent rect. 6 3
3 114.14 wind 3.0 43200 > th dose independent rect. 6 3
9 114.85 precipitation 0.1 14400 > th dose independent rect. 13 3
10 114.85 wind 3.0 43200 < th dose dependent rect. 1 3
12 115.08 precipitation 0.1 14400 < th dose independent rect. 13 3
13 115.08 precipitation 0.1 14400 < th dose dependent rect. 13 3
24 115.86 wind 3.0 43200 < th dose independent rect. 24 9
32 116.37 wind 5.0 43200 < th dose dependent rect. 24 9
39 116.49 humidity 80.0 14400 > th dose independent rect. 14 4
45 116.63 wind 3.0 43200 > th dose independent rect. 24 9
48 116.70 wind 1.0 43200 > th dose dependent rect. 5 4
49 116.71 humidity 80.0 43200 < th dose independent rect. 6 1
59 116.90 precipitation 0.1 43200 > th dose dependent rect. 19 2
63 116.95 humidity 80.0 14400 > th dose independent rect. 13 6
81 117.19 wind 5.0 43200 < th dose dependent rect. 6 3
85 117.22 wind 9.0 43200 < th dose dependent rect. 5 4
100 117.37 wind 1.0 43200 > th dose dependent rect. 7 1
105 117.48 wind 1.0 43200 < th dose independent rect. 1 2
119 117.64 wind 1.0 43200 > th dose independent rect. 1 1
129 117.83 humidity 80.0 14400 < th dose independent rect. 14 4
139 117.95 humidity 70.0 14400 > th dose dependent rect. 14 1
142 117.96 wind 1.0 43200 > th dose dependent rect. 24 9
188 118.37 humidity 80.0 14400 < th dose independent rect. 15 2
199 118.44 humidity 70.0 14400 > th dose dependent rect. 13 4
210 118.53 precipitation 0.1 43200 > th dose dependent rect. 16 4
252 118.87 wind 9.0 14400 > th dose dependent rect. 10 1
296 119.26 precipitation 0.1 14400 < th dose independent rect. 17 1
297 119.26 precipitation 0.1 14400 < th dose dependent rect. 17 1
326 119.48 precipitation 0.1 4320 > th dose dependent rect. 22 19
328 119.52 precipitation 0.1 14400 > th dose independent rect. 17 1
359 119.76 precipitation 0.1 4320 > th dose dependent rect. 19 22
397 119.99 humidity 80.0 43200 > th dose independent rect. 6 1
406 120.02 temperature 25.0 14400 > th dose dependent rect. 13 1
412 120.04 wind 1.0 43200 > th dose independent rect. 24 4
418 120.07 temperature 25.0 14400 > th dose independent rect. 7 1
431 120.15 precipitation 0.1 43200 > th dose dependent rect. 13 7
441 120.20 temperature 25.0 14400 < th dose independent rect. 7 1
443 120.20 precipitation 0.1 4320 > th dose dependent rect. 1 16
454 120.28 precipitation 0.1 14400 < th dose independent rect. 2 18
455 120.28 precipitation 0.1 14400 < th dose dependent rect. 2 18
466 120.34 precipitation 0.1 14400 > th dose independent rect. 2 18
477 120.37 precipitation 0.1 4320 > th dose independent rect. 18 23
480 120.38 precipitation 0.1 4320 < th dose independent rect. 18 23
483 120.38 precipitation 0.1 4320 < th dose dependent rect. 18 23
500 120.46 precipitation 0.1 43200 < th dose independent rect. 19 2
501 120.46 precipitation 0.1 43200 < th dose dependent rect. 19 2
515 120.51 humidity 80.0 14400 > th dose independent sin 20 NA
521 120.53 precipitation 0.1 43200 > th dose independent rect. 19 2
586 120.74 precipitation 0.1 14400 > th dose independent rect. 22 22
587 120.74 temperature 25.0 14400 > th dose dependent rect. 7 8
601 120.77 precipitation 0.1 14400 < th dose independent rect. 22 22
604 120.77 precipitation 0.1 14400 < th dose dependent rect. 22 22
619 120.81 precipitation 0.1 14400 < th dose independent rect. 12 8
621 120.81 precipitation 0.1 14400 < th dose dependent rect. 12 8
636 120.83 temperature 25.0 14400 > th dose dependent rect. 24 15
642 120.85 precipitation 0.1 14400 > th dose independent rect. 12 8
658 120.88 precipitation 0.1 4320 > th dose dependent rect. 4 10
669 120.91 precipitation 0.1 4320 > th dose independent rect. 22 19
676 120.93 precipitation 0.1 14400 > th dose independent rect. 13 17
721 121.00 precipitation 0.1 14400 < th dose independent rect. 12 18
724 121.00 precipitation 0.1 14400 < th dose dependent rect. 12 18
726 121.01 precipitation 0.1 4320 < th dose independent rect. 22 19
727 121.01 wind 9.0 14400 > th dose dependent rect. 7 4
730 121.01 precipitation 0.1 4320 < th dose dependent rect. 22 19
761 121.06 precipitation 0.1 14400 < th dose independent rect. 9 11
762 121.06 precipitation 0.1 14400 < th dose dependent rect. 9 11
806 121.11 precipitation 0.1 14400 > th dose dependent rect. 22 22
810 121.12 precipitation 0.1 14400 > th dose dependent sin 2 NA
815 121.13 precipitation 0.1 14400 > th dose independent rect. 9 11
816 121.13 temperature 25.0 14400 > th dose dependent sin 3 NA
838 121.17 precipitation 0.1 14400 < th dose independent rect. 2 22
843 121.17 precipitation 0.1 14400 < th dose dependent rect. 2 22
848 121.18 precipitation 0.1 4320 < th dose independent rect. 3 14
853 121.18 precipitation 0.1 4320 < th dose dependent rect. 3 14
864 121.20 precipitation 0.1 14400 < th dose independent sin 0 NA
866 121.20 precipitation 0.1 14400 < th dose dependent sin 0 NA
887 121.23 precipitation 0.1 14400 > th dose independent rect. 2 22
947 121.31 humidity 80.0 14400 < th dose independent sin 20 NA
966 121.33 precipitation 0.1 14400 > th dose independent sin 0 NA
977 121.35 precipitation 0.1 14400 > th dose independent rect. 9 21
978 121.35 precipitation 0.1 14400 < th dose independent rect. 9 21
986 121.35 precipitation 0.1 14400 < th dose dependent rect. 9 21
992 121.37 precipitation 0.1 4320 > th dose independent rect. 1 16