Os10g0481000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Formin homology protein A.
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Os10g0481000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Formin homology protein A.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.13 | 0.613 | 9.81 | 0.986 | 0.673 | 1.65 | 0.366 | 0.808 | 0.086 | 10 | 22.1 | 1742 | -- | -- |
| 171.06 | 0.609 | 9.78 | 1.21 | 0.677 | 1.64 | 0.388 | -- | 0.136 | 9.64 | 22.11 | 1501 | -- | -- |
| 170.15 | 0.608 | 9.8 | 0.982 | 0.68 | 1.65 | -- | 0.804 | 0.0856 | 9.71 | 22.11 | 1501 | -- | -- |
| 171.6 | 0.61 | 9.78 | 1.22 | 0.679 | 1.64 | -- | -- | 0.143 | 9.72 | 22.14 | 1501 | -- | -- |
| 189.23 | 0.641 | 9.83 | 1.02 | -- | 1.7 | -- | 0.736 | 0.123 | -- | 22.1 | 960 | -- | -- |
| 268.84 | 0.769 | 9.9 | 0.602 | 0.688 | -- | 0.286 | -- | -0.399 | 9.98 | -- | -- | -- | -- |
| 269.16 | 0.768 | 9.9 | 0.613 | 0.686 | -- | -- | -- | -0.398 | 10 | -- | -- | -- | -- |
| 189.85 | 0.642 | 9.83 | 1.12 | -- | 1.55 | -- | -- | 0.0784 | -- | 22.1 | 889 | -- | -- |
| 205.49 | 0.668 | 9.83 | -- | 0.673 | 1.31 | -- | -- | -0.0719 | 9.53 | 22.31 | 1458 | -- | -- |
| 297.53 | 0.806 | 9.92 | 0.605 | -- | -- | -- | -- | -0.399 | -- | -- | -- | -- | -- |
| 279.07 | 0.781 | 9.92 | -- | 0.684 | -- | -- | -- | -0.467 | 9.96 | -- | -- | -- | -- |
| 219.09 | 0.689 | 9.84 | -- | -- | 1.34 | -- | -- | -0.0433 | -- | 22.35 | 842 | -- | -- |
| 307.17 | 0.818 | 9.94 | -- | -- | -- | -- | -- | -0.466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 165.43 | temperature | 10 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 7 | 174.92 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 14 | 175.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 37 | 175.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 71 | 176.81 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 122 | 177.48 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 330 | 179.69 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 383 | 180.03 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 21 |
| 481 | 180.60 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 495 | 180.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 519 | 180.84 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 586 | 181.19 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 605 | 181.31 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 731 | 182.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 743 | 182.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 805 | 182.52 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 836 | 182.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |