Os10g0479600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein Transporter, Pam16 family protein.
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Os10g0479600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein Transporter, Pam16 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.09 | 0.2 | 10.5 | 0.133 | 0.261 | -0.234 | 0.0682 | 0.248 | 0.133 | 6.75 | 17.69 | 211 | -- | -- |
| 18.3 | 0.199 | 10.5 | 0.134 | 0.26 | -0.236 | 0.0594 | -- | 0.132 | 6.77 | 18.38 | 210 | -- | -- |
| 18.1 | 0.198 | 10.5 | 0.133 | 0.261 | -0.235 | -- | 0.243 | 0.133 | 6.73 | 17.97 | 211 | -- | -- |
| 18.31 | 0.199 | 10.5 | 0.135 | 0.261 | -0.234 | -- | -- | 0.133 | 6.74 | 18.37 | 210 | -- | -- |
| 19.56 | 0.206 | 10.5 | 0.2 | -- | -0.384 | -- | 0.145 | 0.159 | -- | 10.08 | 510 | -- | -- |
| 19.63 | 0.208 | 10.5 | 0.117 | 0.358 | -- | -0.0739 | -- | 0.111 | 4.84 | -- | -- | -- | -- |
| 19.64 | 0.208 | 10.5 | 0.117 | 0.358 | -- | -- | -- | 0.111 | 4.87 | -- | -- | -- | -- |
| 19.16 | 0.204 | 10.5 | 0.125 | -- | -0.394 | -- | -- | 0.146 | -- | 6.33 | 558 | -- | -- |
| 18.77 | 0.202 | 10.5 | -- | 0.262 | -0.231 | -- | -- | 0.116 | 6.57 | 19.13 | 210 | -- | -- |
| 26.4 | 0.24 | 10.5 | 0.13 | -- | -- | -- | -- | 0.12 | -- | -- | -- | -- | -- |
| 20 | 0.209 | 10.5 | -- | 0.36 | -- | -- | -- | 0.0982 | 4.86 | -- | -- | -- | -- |
| 19.46 | 0.205 | 10.5 | -- | -- | -0.404 | -- | -- | 0.128 | -- | 6.72 | 541 | -- | -- |
| 26.85 | 0.242 | 10.5 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.35 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 14 |
| 3 | 17.37 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 5 | 17.56 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 11 | 17.59 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 15 | 17.61 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 17 | 17.63 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 19 | 17.64 | radiation | 10.0 | 10 | < th | dose independent | sin | 20 | NA |
| 26 | 17.67 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 34 | 17.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 35 | 17.72 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 9 | 14 |
| 40 | 17.74 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 67 | 17.77 | radiation | 10.0 | 10 | < th | dose independent | rect. | 5 | 21 |
| 79 | 17.80 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 117 | 17.84 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 15 |
| 139 | 17.85 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 15 |
| 155 | 17.88 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 175 | 17.90 | wind | 3.0 | 90 | < th | dose independent | rect. | 4 | 8 |
| 205 | 17.91 | wind | 3.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 210 | 17.92 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 9 |
| 212 | 17.92 | wind | 3.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 215 | 17.92 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 219 | 17.93 | radiation | 10.0 | 10 | > th | dose independent | rect. | 8 | 8 |
| 242 | 17.95 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 15 | 7 |
| 252 | 17.96 | radiation | 20.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 261 | 17.96 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 21 |
| 265 | 17.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 275 | 17.97 | radiation | 30.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 277 | 17.97 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 282 | 17.97 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 288 | 17.98 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 298 | 17.99 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 9 |
| 305 | 17.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 316 | 17.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 318 | 18.00 | wind | 1.0 | 30 | > th | dose independent | rect. | 23 | 6 |
| 344 | 18.01 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 345 | 18.01 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 418 | 18.04 | temperature | 25.0 | 10 | > th | dose independent | rect. | 16 | 15 |
| 440 | 18.04 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 445 | 18.05 | humidity | 80.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 465 | 18.06 | radiation | 10.0 | 270 | < th | dose independent | sin | 1 | NA |
| 468 | 18.06 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 16 |
| 470 | 18.06 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 18 |
| 475 | 18.06 | radiation | 1.0 | 270 | > th | dose dependent | sin | 3 | NA |
| 504 | 18.06 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 506 | 18.07 | wind | 3.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 552 | 18.08 | radiation | 1.0 | 10 | < th | dose independent | rect. | 23 | 7 |
| 560 | 18.08 | temperature | 30.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 565 | 18.08 | wind | 5.0 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 580 | 18.09 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 16 | 7 |
| 615 | 18.10 | radiation | 10.0 | 10 | > th | dose independent | sin | 21 | NA |
| 616 | 18.10 | radiation | 20.0 | 270 | < th | dose independent | sin | 4 | NA |
| 618 | 18.10 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 623 | 18.10 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 10 |
| 647 | 18.10 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 23 | 7 |
| 674 | 18.11 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 679 | 18.11 | radiation | 20.0 | 270 | < th | dose independent | rect. | 13 | 21 |
| 716 | 18.12 | radiation | 30.0 | 90 | < th | dose independent | rect. | 13 | 10 |
| 727 | 18.12 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 22 |
| 732 | 18.12 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 757 | 18.12 | wind | 9.0 | 30 | < th | dose dependent | rect. | 16 | 18 |
| 777 | 18.13 | radiation | 20.0 | 30 | < th | dose independent | rect. | 16 | 19 |
| 818 | 18.14 | radiation | 30.0 | 10 | < th | dose independent | rect. | 12 | 11 |
| 836 | 18.14 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 845 | 18.14 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 5 | 18 |
| 869 | 18.15 | radiation | 40.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 900 | 18.16 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 902 | 18.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 904 | 18.16 | temperature | 30.0 | 10 | < th | dose independent | rect. | 23 | 6 |
| 906 | 18.16 | humidity | 50.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 912 | 18.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 6 |
| 924 | 18.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 6 |
| 929 | 18.16 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 18 |
| 933 | 18.16 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 935 | 18.16 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 18 |
| 939 | 18.16 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 23 |
| 952 | 18.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 6 |
| 978 | 18.16 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 18 |
| 997 | 18.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |