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Os10g0477000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0118) R2 : 0.481
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.53 (0.0286) R2dC : 0.392 R2C : 0.376
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.211 (0.0249) R2dN8 : 0.105 R2N8 : 0.0887
σ : 0.223
deviance : 22.71
__
_____
C
peak time of C : 1.65
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.42 0.202 11.1 0.119 0.52 -0.213 -0.451 -0.986 0.256 1.55 0.7788 4578 -- --
18.66 0.201 11.1 0.101 0.52 -0.382 -0.471 -- 0.265 1.48 1.044 2576 -- --
19.23 0.204 11.1 0.143 0.519 -0.183 -- -0.895 0.254 1.6 0.944 4573 -- --
19.52 0.206 11.1 0.132 0.52 -0.337 -- -- 0.259 1.58 1.002 2576 -- --
35.47 0.277 11.1 0.166 -- -0.034 -- -1.29 0.256 -- 1.001 3001 -- --
20.63 0.213 11.1 0.22 0.525 -- -0.405 -- 0.234 1.56 -- -- -- --
21.28 0.216 11.1 0.233 0.526 -- -- -- 0.237 1.64 -- -- -- --
35.95 0.279 11.1 0.135 -- -0.398 -- -- 0.266 -- 1 2243 -- --
19.94 0.208 11.1 -- 0.531 -0.388 -- -- 0.258 1.51 1.01 2576 -- --
38.16 0.289 11.1 0.254 -- -- -- -- 0.248 -- -- -- -- --
22.71 0.223 11.1 -- 0.53 -- -- -- 0.211 1.65 -- -- -- --
36.39 0.281 11.1 -- -- -0.449 -- -- 0.26 -- 1 2260 -- --
39.87 0.295 11.1 -- -- -- -- -- 0.22 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.61 precipitation 0.1 4320 > th dose dependent rect. 3 11
3 17.63 precipitation 0.1 4320 > th dose dependent rect. 24 17
4 17.64 precipitation 0.1 14400 > th dose dependent rect. 19 1
5 17.64 precipitation 0.1 4320 > th dose dependent rect. 2 15
9 17.66 precipitation 0.1 14400 > th dose independent rect. 19 1
11 17.68 precipitation 0.1 14400 < th dose independent rect. 19 1
12 17.68 precipitation 0.1 14400 < th dose dependent rect. 19 1
13 17.70 precipitation 0.1 14400 > th dose dependent rect. 13 1
14 17.71 wind 1.0 1440 > th dose independent rect. 12 7
16 17.72 wind 1.0 4320 > th dose independent rect. 17 2
23 17.72 precipitation 0.1 4320 > th dose dependent rect. 18 23
24 17.74 wind 1.0 1440 < th dose independent rect. 12 7
29 17.76 precipitation 0.1 4320 > th dose dependent rect. 3 4
30 17.76 precipitation 0.1 4320 > th dose dependent rect. 18 20
38 17.80 precipitation 0.1 4320 > th dose independent rect. 3 11
48 17.83 precipitation 0.1 4320 > th dose dependent rect. 18 12
49 17.83 precipitation 0.1 4320 > th dose dependent rect. 18 14
51 17.84 precipitation 0.1 4320 > th dose independent rect. 3 3
54 17.84 precipitation 0.1 4320 < th dose independent rect. 3 11
55 17.84 precipitation 0.1 4320 > th dose independent rect. 3 14
56 17.84 precipitation 0.1 4320 < th dose dependent rect. 3 11
59 17.85 wind 1.0 4320 < th dose independent rect. 17 2
60 17.85 precipitation 0.1 4320 < th dose independent rect. 3 3
66 17.85 precipitation 0.1 4320 < th dose dependent rect. 3 3
72 17.86 precipitation 0.1 4320 < th dose independent rect. 3 14
74 17.86 precipitation 0.1 4320 < th dose dependent rect. 3 14
84 17.89 wind 1.0 1440 < th dose independent rect. 9 10
88 17.89 precipitation 0.1 4320 < th dose independent rect. 24 17
90 17.89 precipitation 0.1 4320 < th dose dependent rect. 24 17
106 17.91 wind 1.0 1440 < th dose dependent rect. 12 7
126 17.94 precipitation 0.1 4320 > th dose dependent rect. 13 4
137 17.96 precipitation 0.1 4320 > th dose dependent sin 5 NA
142 17.97 precipitation 0.1 14400 < th dose independent rect. 13 1
148 17.97 precipitation 0.1 14400 < th dose dependent rect. 13 1
154 17.99 humidity 80.0 14400 > th dose independent rect. 14 2
162 18.01 precipitation 0.1 14400 > th dose independent rect. 13 1
168 18.02 humidity 80.0 14400 > th dose independent rect. 9 2
187 18.03 precipitation 0.1 4320 > th dose independent rect. 18 23
188 18.03 precipitation 0.1 4320 < th dose independent rect. 18 23
194 18.03 precipitation 0.1 4320 < th dose dependent rect. 18 23
216 18.05 precipitation 0.1 4320 > th dose dependent rect. 7 7
218 18.05 precipitation 0.1 4320 > th dose dependent rect. 7 10
231 18.07 wind 1.0 1440 < th dose independent rect. 12 1
234 18.07 precipitation 0.1 14400 < th dose independent rect. 13 4
238 18.07 precipitation 0.1 14400 < th dose dependent rect. 13 4
254 18.09 humidity 80.0 14400 < th dose independent rect. 14 1
256 18.09 precipitation 0.1 14400 > th dose independent rect. 13 4
257 18.09 humidity 90.0 14400 > th dose dependent rect. 7 1
261 18.10 humidity 80.0 14400 < th dose independent rect. 10 1
264 18.10 humidity 80.0 14400 > th dose dependent rect. 13 2
280 18.12 wind 9.0 14400 > th dose dependent rect. 10 1
287 18.12 wind 1.0 1440 < th dose dependent rect. 9 10
288 18.13 precipitation 0.1 4320 > th dose independent sin 4 NA
294 18.13 wind 1.0 1440 < th dose dependent rect. 12 2
308 18.14 wind 1.0 1440 < th dose dependent rect. 12 4
313 18.15 precipitation 0.1 4320 < th dose independent sin 4 NA
316 18.15 humidity 80.0 14400 > th dose independent rect. 9 7
321 18.15 precipitation 0.1 4320 < th dose dependent sin 4 NA
330 18.16 wind 1.0 1440 > th dose independent rect. 12 1
354 18.18 wind 3.0 43200 < th dose independent rect. 5 2
363 18.18 humidity 90.0 4320 > th dose dependent rect. 6 3
383 18.20 humidity 80.0 14400 < th dose independent rect. 9 6
389 18.20 humidity 50.0 14400 > th dose dependent rect. 14 1
399 18.21 wind 1.0 1440 < th dose independent rect. 12 4
412 18.22 wind 1.0 1440 < th dose independent rect. 9 5
421 18.23 wind 1.0 720 < th dose independent rect. 23 2
427 18.23 humidity 90.0 14400 < th dose dependent rect. 14 1
436 18.24 wind 3.0 43200 > th dose independent rect. 5 2
441 18.24 precipitation 0.1 4320 > th dose independent rect. 18 14
442 18.24 precipitation 0.1 4320 < th dose independent rect. 18 14
459 18.24 precipitation 0.1 4320 < th dose dependent rect. 18 14
463 18.25 precipitation 0.1 14400 < th dose independent rect. 16 1
474 18.25 precipitation 0.1 14400 < th dose dependent rect. 16 1
475 18.25 wind 1.0 43200 > th dose dependent rect. 5 2
483 18.25 wind 3.0 43200 < th dose dependent rect. 24 8
488 18.26 humidity 90.0 14400 > th dose independent rect. 6 2
503 18.26 precipitation 0.1 4320 > th dose independent rect. 18 12
529 18.27 precipitation 0.1 4320 < th dose independent rect. 18 12
548 18.27 precipitation 0.1 4320 < th dose dependent rect. 18 12
552 18.28 wind 1.0 1440 < th dose independent rect. 9 7
637 18.31 precipitation 0.1 4320 < th dose independent rect. 23 21
640 18.31 wind 5.0 43200 < th dose dependent rect. 5 2
641 18.31 wind 9.0 43200 < th dose dependent rect. 5 2
659 18.31 precipitation 0.1 4320 < th dose dependent rect. 23 21
662 18.32 humidity 90.0 14400 < th dose independent rect. 6 2
672 18.32 precipitation 0.1 4320 > th dose independent rect. 23 21
681 18.32 wind 1.0 1440 < th dose dependent rect. 9 5
720 18.33 humidity 60.0 30 > th dose dependent rect. 17 18
723 18.34 wind 1.0 1440 > th dose independent rect. 12 4
745 18.34 wind 3.0 43200 < th dose dependent rect. 3 5
789 18.36 humidity 80.0 1440 < th dose independent rect. 11 1
803 18.36 wind 1.0 720 > th dose independent rect. 10 16
816 18.37 humidity 80.0 14400 > th dose independent sin 22 NA
828 18.37 wind 1.0 720 < th dose independent rect. 9 17
849 18.38 radiation 1.0 14400 > th dose independent rect. 7 1
850 18.38 radiation 1.0 14400 < th dose independent rect. 7 1
857 18.38 wind 1.0 720 < th dose independent rect. 12 14
924 18.40 precipitation 0.1 14400 < th dose independent rect. 13 7
952 18.40 precipitation 0.1 14400 < th dose dependent rect. 13 7
962 18.41 wind 3.0 14400 < th dose independent rect. 24 1
966 18.41 precipitation 0.1 4320 > th dose independent rect. 7 7
967 18.41 precipitation 0.1 14400 > th dose independent rect. 13 7
981 18.41 radiation 1.0 4320 < th dose dependent rect. 7 1