Os10g0475900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin domain containing protein.
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Os10g0475900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.63 | 0.569 | 7.99 | 3.45 | 1.12 | -0.595 | -0.524 | -0.763 | 1.14 | 21.6 | 70 | 2731 | -- | -- |
| 147.46 | 0.566 | 7.98 | 3.53 | 1.13 | -0.661 | -0.569 | -- | 1.16 | 21.6 | 69.82 | 2715 | -- | -- |
| 147.64 | 0.566 | 7.99 | 3.46 | 1.12 | -0.603 | -- | -0.824 | 1.14 | 21.6 | 69.44 | 2721 | -- | -- |
| 148.44 | 0.567 | 7.99 | 3.55 | 1.12 | -0.657 | -- | -- | 1.11 | 21.6 | 68.02 | 2725 | -- | -- |
| 220.56 | 0.692 | 7.96 | 3.45 | -- | -0.654 | -- | -0.799 | 1.1 | -- | 68 | 4395 | -- | -- |
| 160.54 | 0.594 | 7.99 | 3.45 | 1.08 | -- | -0.671 | -- | 1.11 | 21.3 | -- | -- | -- | -- |
| 162.16 | 0.596 | 7.99 | 3.47 | 1.08 | -- | -- | -- | 1.12 | 21.4 | -- | -- | -- | -- |
| 217.66 | 0.687 | 7.95 | 3.54 | -- | -0.664 | -- | -- | 1.13 | -- | 69 | 2936 | -- | -- |
| 289.42 | 0.792 | 7.97 | -- | 0.859 | -1.78 | -- | -- | 0.865 | 20.6 | 62.01 | 47518 | -- | -- |
| 230.37 | 0.709 | 7.96 | 3.48 | -- | -- | -- | -- | 1.11 | -- | -- | -- | -- | -- |
| 479.78 | 1.02 | 8.07 | -- | 1.08 | -- | -- | -- | 0.729 | 21.6 | -- | -- | -- | -- |
| 300.06 | 0.807 | 8.08 | -- | -- | -3.13 | -- | -- | 0.579 | -- | 64.28 | 47520 | -- | -- |
| 549.31 | 1.09 | 8.04 | -- | -- | -- | -- | -- | 0.726 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.68 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 2 | 141.74 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 12 | 141.93 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 22 | 142.01 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 25 | 142.03 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 80 | 142.60 | wind | 3.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 90 | 142.72 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 110 | 142.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 124 | 142.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 131 | 143.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 152 | 143.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 268 | 143.68 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 269 | 143.68 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 270 | 143.68 | wind | 9.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 281 | 143.72 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 336 | 143.91 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 432 | 144.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 487 | 144.51 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 600 | 145.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 667 | 145.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 671 | 145.28 | wind | 3.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 677 | 145.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 727 | 145.48 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 734 | 145.51 | wind | 3.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 772 | 145.64 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 828 | 145.79 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 846 | 145.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 855 | 145.84 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 8 |
| 857 | 145.85 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 909 | 145.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 920 | 146.01 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 937 | 146.05 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 954 | 146.08 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 956 | 146.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |