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Os10g0471000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF810 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.23 (0.0287) R2 : 0.617
β1 : 2.07 (0.105) R2dD : 0.338 R2D : 0.264
β2 : 1.08 (0.0752) R2dC : 0.178 R2C : 0.14
β3 : -1.16 (0.11) R2dE : 0.0981 R2E : 0.0563
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.509 (0.0619) R2dN8 : 0.0779 R2N8 : 0.0335
σ : 0.536
deviance : 132.35
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C
peak time of C : 5.17
E
wheather : humidity
threshold : 66
memory length : 928
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
129.44 0.535 7.23 1.93 1.07 -1.21 -0.0883 1.42 0.504 5.18 62.83 934 -- --
132.39 0.536 7.23 2.07 1.06 -1.13 -0.00344 -- 0.51 5.07 65.79 945 -- --
129.45 0.53 7.23 1.93 1.07 -1.21 -- 1.4 0.5 5.19 63.44 934 -- --
132.35 0.536 7.23 2.07 1.08 -1.16 -- -- 0.509 5.17 66 928 -- --
174.25 0.615 7.26 1.91 -- -1.34 -- 1.55 0.484 -- 64.63 1144 -- --
152.05 0.578 7.22 2.07 1.05 -- -0.229 -- 0.603 3.48 -- -- -- --
152.21 0.578 7.22 2.07 1.05 -- -- -- 0.605 3.48 -- -- -- --
177.1 0.62 7.25 2.11 -- -1.37 -- -- 0.485 -- 67 1149 -- --
243.16 0.726 7.27 -- 1.2 -1.26 -- -- 0.346 5.22 57.53 875 -- --
214.12 0.684 7.22 2.12 -- -- -- -- 0.633 -- -- -- -- --
265.64 0.762 7.27 -- 1.09 -- -- -- 0.374 3.47 -- -- -- --
290.71 0.794 7.27 -- -- -1.44 -- -- 0.398 -- 43.92 1133 -- --
332.55 0.851 7.27 -- -- -- -- -- 0.398 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.50 humidity 60 720 > th dose dependent rect. 7 21
2 126.64 humidity 60 720 > th dose dependent rect. 14 14
8 126.89 humidity 60 720 > th dose dependent rect. 12 16
12 127.12 humidity 90 270 > th dose dependent rect. 7 20
14 127.21 humidity 80 720 > th dose independent rect. 17 2
22 127.81 humidity 80 270 > th dose dependent rect. 17 10
57 129.02 humidity 90 10 < th dose independent rect. 13 23
64 129.06 radiation 10 720 < th dose dependent rect. 16 1
67 129.12 radiation 20 720 < th dose dependent rect. 14 14
78 129.24 humidity 60 720 > th dose dependent rect. 16 1
99 129.48 humidity 90 270 > th dose dependent rect. 13 14
143 130.10 radiation 20 720 < th dose independent rect. 14 14
159 130.22 humidity 90 270 > th dose dependent sin 17 NA
170 130.35 humidity 90 10 < th dose independent sin 9 NA
175 130.40 humidity 90 10 > th dose independent sin 9 NA
181 130.47 humidity 90 10 < th dose independent rect. 15 16
186 130.50 humidity 60 720 > th dose dependent sin 16 NA
188 130.50 humidity 60 720 > th dose dependent rect. 23 23
226 130.76 humidity 90 720 < th dose dependent rect. 19 21
245 130.89 humidity 90 10 < th dose independent rect. 11 23
254 130.95 humidity 80 1440 > th dose independent rect. 23 18
263 130.98 humidity 60 720 > th dose dependent rect. 12 23
264 130.99 humidity 90 10 > th dose independent rect. 20 16
279 131.11 humidity 60 720 > th dose dependent rect. 14 23
293 131.16 humidity 90 10 < th dose independent rect. 18 14
309 131.30 humidity 60 720 > th dose dependent no NA NA
314 131.33 humidity 80 1440 < th dose independent rect. 23 18
320 131.34 humidity 60 720 > th dose dependent rect. 21 23
323 131.36 humidity 80 1440 < th dose independent rect. 23 16
346 131.43 humidity 90 10 < th dose independent rect. 3 23
347 131.43 humidity 90 720 < th dose dependent rect. 12 22
361 131.50 humidity 60 720 > th dose dependent rect. 16 23
375 131.53 humidity 90 720 < th dose dependent rect. 12 19
382 131.56 radiation 10 720 < th dose dependent rect. 9 19
389 131.59 humidity 80 720 > th dose dependent rect. 8 14
392 131.60 humidity 90 10 < th dose independent no NA NA
422 131.70 humidity 90 10 < th dose independent rect. 23 23
472 131.85 humidity 90 10 > th dose independent rect. 18 18
509 131.94 humidity 80 1440 < th dose independent sin 3 NA
531 131.98 humidity 90 10 > th dose independent rect. 1 23
547 132.03 humidity 90 10 > th dose independent rect. 7 23
587 132.13 humidity 90 10 > th dose independent rect. 9 23
601 132.18 radiation 20 720 < th dose independent rect. 12 16
629 132.26 humidity 90 10 > th dose independent no NA NA
634 132.26 humidity 90 10 > th dose independent rect. 11 23
673 132.34 humidity 80 1440 > th dose independent sin 3 NA
682 132.37 radiation 10 720 < th dose independent rect. 16 1
699 132.41 humidity 90 10 > th dose independent rect. 23 23
721 132.49 radiation 10 1440 < th dose dependent rect. 8 9
762 132.58 humidity 90 10 > th dose independent rect. 11 21
782 132.61 radiation 30 720 > th dose dependent rect. 15 17
790 132.63 humidity 60 720 > th dose dependent rect. 3 23
803 132.67 radiation 10 720 < th dose dependent rect. 15 3
807 132.69 radiation 10 720 < th dose dependent rect. 14 5
865 132.81 humidity 80 1440 < th dose independent rect. 9 5
889 132.85 humidity 80 720 > th dose independent rect. 7 21
896 132.85 humidity 90 720 > th dose dependent rect. 20 1
944 132.92 humidity 80 720 > th dose dependent rect. 15 6
963 132.96 humidity 80 1440 < th dose independent rect. 8 7
978 132.99 humidity 80 720 > th dose independent rect. 7 13
979 132.99 humidity 90 30 > th dose independent rect. 11 18
991 133.02 humidity 80 720 > th dose independent rect. 9 19
997 133.03 humidity 90 720 < th dose dependent no NA NA
1000 133.04 humidity 80 1440 > th dose independent rect. 9 5