Os10g0465000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os10g0465000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.92 | 0.364 | 10.7 | -0.0616 | 0.934 | 0.436 | -0.0721 | 0.938 | 0.377 | 12.6 | 67 | 2952 | -- | -- |
| 61.03 | 0.364 | 10.6 | -0.0313 | 0.958 | 0.551 | -0.115 | -- | 0.36 | 12.7 | 66.88 | 3191 | -- | -- |
| 59.94 | 0.361 | 10.7 | -0.0629 | 0.934 | 0.434 | -- | 0.948 | 0.377 | 12.6 | 67 | 2951 | -- | -- |
| 61.08 | 0.364 | 10.7 | -0.0387 | 0.957 | 0.55 | -- | -- | 0.361 | 12.7 | 66.89 | 3180 | -- | -- |
| 107.63 | 0.483 | 10.6 | -0.0395 | -- | 0.924 | -- | 0.529 | 0.456 | -- | 68.02 | 3871 | -- | -- |
| 68.3 | 0.387 | 10.6 | -0.0595 | 0.962 | -- | -0.0235 | -- | 0.443 | 12.6 | -- | -- | -- | -- |
| 68.3 | 0.387 | 10.6 | -0.0604 | 0.962 | -- | -- | -- | 0.443 | 12.6 | -- | -- | -- | -- |
| 94.59 | 0.453 | 10.6 | 0.0684 | -- | 1.02 | -- | -- | 0.559 | -- | 74 | 1042 | -- | -- |
| 61.12 | 0.364 | 10.7 | -- | 0.958 | 0.551 | -- | -- | 0.366 | 12.7 | 66.98 | 3180 | -- | -- |
| 126.25 | 0.525 | 10.7 | -0.0943 | -- | -- | -- | -- | 0.427 | -- | -- | -- | -- | -- |
| 68.4 | 0.387 | 10.6 | -- | 0.963 | -- | -- | -- | 0.45 | 12.6 | -- | -- | -- | -- |
| 94.54 | 0.453 | 10.6 | -- | -- | 0.994 | -- | -- | 0.524 | -- | 75 | 1042 | -- | -- |
| 126.49 | 0.525 | 10.6 | -- | -- | -- | -- | -- | 0.437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.86 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 3 | 57.00 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 7 | 57.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 13 |
| 16 | 57.98 | humidity | 70.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 19 | 58.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 3 |
| 24 | 58.25 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 27 | 58.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 33 | 58.60 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 37 | 58.67 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 40 | 58.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 5 | 20 |
| 43 | 58.80 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 45 | 58.83 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 54 | 58.91 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 58 | 58.93 | wind | 7.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 59 | 58.94 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 61 | 58.99 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 62 | 58.99 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 64 | 59.00 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 11 |
| 73 | 59.07 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 74 | 59.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 76 | 59.07 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 77 | 59.07 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 80 | 59.07 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 81 | 59.07 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 83 | 59.07 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 86 | 59.07 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 90 | 59.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 92 | 59.13 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 97 | 59.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 98 | 59.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 99 | 59.15 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 102 | 59.18 | radiation | 20.0 | 270 | < th | dose independent | rect. | 6 | 3 |
| 108 | 59.20 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 112 | 59.21 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 120 | 59.26 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 20 |
| 125 | 59.28 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 131 | 59.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 133 | 59.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 134 | 59.29 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 137 | 59.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 138 | 59.29 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 147 | 59.29 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 151 | 59.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 153 | 59.30 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 182 | 59.41 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 186 | 59.43 | temperature | 25.0 | 90 | > th | dose independent | sin | 6 | NA |
| 189 | 59.44 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 5 |
| 238 | 59.50 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 240 | 59.50 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 241 | 59.51 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 242 | 59.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 245 | 59.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 249 | 59.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 254 | 59.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 255 | 59.51 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 256 | 59.51 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 262 | 59.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 21 |
| 312 | 59.61 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 6 | 21 |
| 353 | 59.65 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 4 |
| 358 | 59.66 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 360 | 59.68 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 377 | 59.72 | temperature | 25.0 | 90 | < th | dose independent | sin | 6 | NA |
| 381 | 59.73 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 400 | 59.77 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 17 |
| 410 | 59.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 18 |
| 413 | 59.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 423 | 59.84 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 466 | 59.93 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 477 | 59.95 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 18 |
| 491 | 59.97 | humidity | 70.0 | 720 | > th | dose independent | rect. | 5 | 12 |
| 504 | 59.98 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 6 |
| 516 | 60.01 | radiation | 30.0 | 270 | < th | dose independent | rect. | 14 | 11 |
| 518 | 60.01 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 597 | 60.07 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 602 | 60.07 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 606 | 60.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 609 | 60.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 610 | 60.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 614 | 60.08 | radiation | 1.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 616 | 60.08 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 620 | 60.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 6 |
| 625 | 60.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 6 |
| 655 | 60.11 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 20 |
| 690 | 60.13 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 699 | 60.13 | humidity | 70.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 715 | 60.14 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 731 | 60.16 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 735 | 60.17 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 761 | 60.19 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 766 | 60.19 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 768 | 60.20 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 783 | 60.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 830 | 60.29 | humidity | 80.0 | 270 | > th | dose independent | rect. | 7 | 1 |
| 840 | 60.29 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 842 | 60.30 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 849 | 60.31 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 852 | 60.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 21 |
| 858 | 60.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 892 | 60.37 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 893 | 60.37 | radiation | 40.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 910 | 60.39 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 9 |
| 923 | 60.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 942 | 60.42 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 966 | 60.44 | humidity | 50.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 980 | 60.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 14 |
| 987 | 60.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 14 |