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Os10g0463800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0245) R2 : 0.851
β1 : -- (--) R2dD : -- R2D : --
β2 : 3 (0.0589) R2dC : 0.85 R2C : 0.845
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.191 (0.0516) R2dN8 : 0.00579 R2N8 : 0.00123
σ : 0.462
deviance : 97.65
__
_____
C
peak time of C : 22.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
80.51 0.422 13.3 0.468 2.45 -0.605 0.298 0.391 0.255 22.4 10.96 15 -- --
81 0.419 13.3 0.443 2.41 -0.618 0.0664 -- 0.248 22.4 11.03 15 -- --
80.68 0.418 13.3 0.477 2.43 -0.615 -- 0.25 0.265 22.3 10.08 13 -- --
80.9 0.419 13.3 0.468 2.42 -0.615 -- -- 0.245 22.4 11.05 14 -- --
187.51 0.641 13.2 0.345 -- -2.03 -- 0.351 0.283 -- 4.64 13 -- --
93.28 0.453 13.3 0.409 2.99 -- 0.0795 -- 0.237 22.7 -- -- -- --
93.31 0.452 13.3 0.406 2.99 -- -- -- 0.236 22.7 -- -- -- --
188.31 0.642 13.2 0.354 -- -2.02 -- -- 0.285 -- 4.64 13 -- --
85.81 0.431 13.3 -- 2.51 -0.567 -- -- 0.201 22.4 14.84 9 -- --
646.29 1.19 13.2 0.465 -- -- -- -- 0.253 -- -- -- -- --
97.65 0.462 13.3 -- 3 -- -- -- 0.191 22.7 -- -- -- --
191.61 0.647 13.2 -- -- -2.03 -- -- 0.246 -- 4.64 13 -- --
652 1.19 13.2 -- -- -- -- -- 0.202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.00 radiation 1.0 1440 > th dose independent rect. 11 2
2 72.36 radiation 1.0 1440 > th dose independent rect. 11 4
6 72.85 radiation 1.0 270 > th dose independent rect. 4 10
21 73.24 temperature 15.0 270 > th dose independent rect. 14 16
24 73.65 temperature 30.0 270 < th dose dependent rect. 1 7
25 73.72 atmosphere 1000.0 270 > th dose independent rect. 24 8
27 73.88 radiation 40.0 30 < th dose dependent rect. 14 20
35 74.29 precipitation 0.1 270 < th dose independent rect. 19 18
36 74.29 precipitation 0.1 270 < th dose dependent rect. 19 18
37 74.37 temperature 20.0 270 > th dose independent rect. 13 7
39 74.52 temperature 10.0 270 > th dose dependent rect. 6 7
45 74.72 atmosphere 1000.0 270 > th dose independent rect. 1 18
62 74.98 temperature 30.0 10 < th dose dependent rect. 2 8
68 75.05 radiation 1.0 1440 < th dose independent rect. 11 4
69 75.05 radiation 1.0 1440 < th dose dependent rect. 11 4
70 75.06 atmosphere 1010.0 90 < th dose independent rect. 15 17
80 75.16 humidity 50.0 270 > th dose independent rect. 19 18
82 75.27 radiation 1.0 1440 < th dose independent rect. 13 1
84 75.27 radiation 1.0 1440 < th dose dependent rect. 13 1
115 75.44 wind 9.0 270 < th dose independent rect. 13 6
117 75.46 temperature 10.0 270 > th dose independent rect. 13 6
119 75.46 atmosphere 1010.0 270 < th dose independent rect. 13 6
121 75.46 temperature 10.0 270 > th dose independent rect. 19 18
122 75.46 atmosphere 995.0 270 > th dose independent rect. 19 18
123 75.46 radiation 40.0 270 < th dose dependent rect. 24 8
124 75.47 temperature 15.0 270 > th dose independent rect. 23 9
132 75.59 atmosphere 1000.0 10 > th dose independent rect. 1 9
134 75.59 temperature 10.0 270 > th dose dependent rect. 13 7
135 75.60 wind 9.0 270 < th dose independent rect. 19 18
140 75.66 humidity 70.0 270 > th dose independent rect. 24 8
141 75.67 precipitation 0.1 270 < th dose independent rect. 13 6
142 75.67 precipitation 0.1 270 < th dose dependent rect. 13 6
143 75.69 wind 1.0 270 > th dose independent rect. 13 6
152 75.75 atmosphere 995.0 270 > th dose independent rect. 13 6
158 75.79 temperature 30.0 270 < th dose independent rect. 24 8
159 75.79 humidity 50.0 270 > th dose independent rect. 24 8
162 75.79 atmosphere 1015.0 270 < th dose independent rect. 24 8
163 75.79 temperature 10.0 270 > th dose independent rect. 8 16
166 75.81 wind 9.0 270 < th dose independent rect. 24 8
170 75.83 temperature 10.0 10 > th dose dependent rect. 8 7
173 75.85 radiation 40.0 270 < th dose independent rect. 24 8
175 75.87 precipitation 0.1 270 < th dose independent rect. 8 16
176 75.87 precipitation 0.1 270 < th dose dependent rect. 8 16
194 76.06 humidity 90.0 270 < th dose independent rect. 6 7
208 76.14 wind 9.0 270 < th dose independent rect. 8 16
209 76.15 humidity 50.0 90 > th dose dependent rect. 1 9
213 76.17 atmosphere 1010.0 270 < th dose independent rect. 13 19
219 76.25 wind 1.0 270 > th dose independent rect. 8 16
226 76.27 atmosphere 1000.0 270 > th dose independent rect. 13 19
261 76.42 temperature 10.0 270 > th dose dependent rect. 14 16
269 76.47 temperature 10.0 90 > th dose dependent rect. 15 6
291 76.61 radiation 1.0 270 > th dose independent sin 3 NA
298 76.63 radiation 1.0 270 < th dose independent sin 3 NA
326 76.77 precipitation 0.1 270 < th dose independent rect. 6 8
329 76.77 precipitation 0.1 270 < th dose dependent rect. 6 8
341 76.84 temperature 20.0 270 > th dose independent rect. 6 7
345 76.85 temperature 10.0 270 > th dose independent rect. 6 8
346 76.85 atmosphere 995.0 270 > th dose independent rect. 6 8
347 76.85 atmosphere 1015.0 270 < th dose independent rect. 6 8
350 76.86 humidity 50.0 270 > th dose independent rect. 6 8
359 76.89 radiation 30.0 10 < th dose independent rect. 2 8
368 76.93 atmosphere 1000.0 10 > th dose independent rect. 15 19
370 76.93 temperature 10.0 270 > th dose dependent rect. 20 16
374 76.96 temperature 25.0 30 > th dose independent rect. 8 7
387 77.02 precipitation 0.1 270 < th dose independent rect. 24 8
389 77.02 precipitation 0.1 270 < th dose dependent rect. 24 8
395 77.06 wind 9.0 270 < th dose independent rect. 14 16
399 77.07 humidity 50.0 270 > th dose independent rect. 8 16
400 77.07 wind 9.0 270 < th dose independent rect. 1 18
407 77.08 wind 7.0 270 < th dose independent rect. 19 6
419 77.11 humidity 90.0 270 < th dose independent rect. 13 6
426 77.12 precipitation 0.1 270 < th dose independent rect. 19 6
428 77.12 precipitation 0.1 270 < th dose dependent rect. 19 6
431 77.13 precipitation 0.1 270 < th dose independent rect. 17 22
433 77.13 temperature 10.0 10 > th dose dependent rect. 15 7
434 77.13 precipitation 0.1 270 < th dose dependent rect. 17 22
437 77.14 radiation 20.0 30 < th dose independent rect. 16 18
439 77.15 wind 1.0 270 > th dose independent rect. 7 7
440 77.17 humidity 60.0 270 > th dose independent rect. 19 6
441 77.17 wind 9.0 270 < th dose independent rect. 6 8
443 77.18 radiation 10.0 30 > th dose independent rect. 6 9
459 77.19 temperature 10.0 270 > th dose independent rect. 19 6
460 77.19 temperature 30.0 270 < th dose independent rect. 19 6
462 77.19 atmosphere 995.0 270 > th dose independent rect. 19 6
463 77.19 radiation 1.0 270 < th dose independent rect. 19 6
468 77.19 temperature 10.0 270 > th dose independent rect. 1 18
469 77.19 atmosphere 1015.0 270 < th dose independent rect. 1 18
470 77.19 radiation 1.0 270 < th dose dependent rect. 19 6
481 77.22 humidity 60.0 14400 > th dose independent rect. 20 7
497 77.29 temperature 25.0 30 > th dose independent rect. 5 10
500 77.30 radiation 10.0 10 > th dose independent rect. 8 7
501 77.30 atmosphere 1000.0 10 > th dose independent rect. 2 19
508 77.33 radiation 30.0 30 < th dose independent rect. 14 20
512 77.35 wind 1.0 270 > th dose independent rect. 19 6
534 77.39 radiation 1.0 270 < th dose dependent rect. 18 8
552 77.43 precipitation 0.1 270 < th dose independent rect. 18 8
558 77.43 precipitation 0.1 270 < th dose dependent rect. 18 8
566 77.44 temperature 15.0 10 > th dose independent rect. 15 19
570 77.47 temperature 20.0 10 > th dose independent rect. 15 7
573 77.48 radiation 40.0 90 < th dose independent rect. 14 7
580 77.50 temperature 10.0 90 > th dose dependent rect. 21 18
584 77.52 radiation 1.0 270 < th dose independent rect. 18 8
640 77.60 radiation 40.0 270 < th dose independent rect. 14 16
657 77.61 humidity 50.0 10 > th dose dependent rect. 2 8
666 77.62 temperature 10.0 10 > th dose dependent rect. 22 17
700 77.70 atmosphere 995.0 270 > th dose dependent rect. 13 6
715 77.74 temperature 30.0 10 < th dose independent rect. 2 8
739 77.80 radiation 30.0 10 < th dose dependent rect. 2 19
789 77.89 radiation 20.0 10 < th dose dependent sin 0 NA
868 77.99 wind 1.0 270 > th dose independent rect. 19 18
881 78.00 radiation 1.0 270 < th dose dependent sin 3 NA
899 78.05 wind 1.0 270 > th dose independent rect. 24 8
922 78.09 precipitation 0.1 10 < th dose independent rect. 21 18
927 78.09 precipitation 0.1 10 < th dose dependent rect. 21 18
952 78.15 temperature 25.0 30 > th dose independent rect. 23 16
953 78.15 atmosphere 995.0 270 > th dose independent rect. 8 16
980 78.22 temperature 20.0 270 > th dose independent rect. 15 2